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Updated: Jun 21, 2026

How to Measure Cortical Folding from MR Images: a Step-by-Step Tutorial to Compute Local Gyrification Index
Published on: January 2, 2012
UNSUPERVISED CORTICAL SURFACE REGISTRATION NETWORK FOR ALIGNING GYRALNET
Jiale Cheng1,2, Fenqiang Zhao1, Dan Hu1
1Department of Radiology and Biomedical Research Imaging Center, University of North Carolina at Chapel Hill, NC, USA.
None:
The cortical 3-hinge gyrus (3HG) and its network (GyralNet) play key roles in understanding the regularity and variability of brain structure and function. However, existing cortical surface registration methods overlook these features, resulting in suboptimal alignment across subjects. Currently, no 3HG and GyralNet atlas exist for registration, and generation of the corresponding atlas requires extensive runtime using traditional methods. To enable better registration of these features, we introduce an unsupervised learning framework to jointly develop 3HGs and GyralNet atlas and register the individual cortical features onto the atlas. To incorporate the graph structure of 3HGs and GyralNet into the registration network, we convert them into surface distance maps, facilitating effective integration. To effectively learn large deformations, a multi-level spherical registration network based on spherical U-Net is introduced to perform registration in a coarse-to-fine manner. Experiments demonstrate our approach's ability to generate 3HGs and GyralNet atlas with detailed patterns and effectively improve registration accuracy.
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