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Unveiling the structure, function and dynamics of StmPr1 in Stenotrophomonas maltophilia virulence
Max Sommer1, Amr Negm2,3, Lasse Outzen4
1Department of Chemistry, Institute of Biochemistry and Molecular Biology, Laboratory for Structural Biology of Infection and Inflammation, University of Hamburg, c/o DESY, Build. 22a. Notkestr. 85, 22603, Hamburg, Germany. m.sommer.92@gmx.de.
Abstract:
The increase in infections caused by multi-resistant Gram-negative bacteria, like Stenotrophomonas maltophilia, has become a growing health crisis worldwide. S. maltophilia poses a risk because of its tendency to opportunistically infecting patience for example through colonization of catheters in hospital environments using its intrinsic resistance against multiple antibiotics. Through the COVID-19 pandemic it gained more prominence by being a key pathogen in respiratory co-infections. This study will present a structural analysis of StmPr1, S. maltophilia's main virulence factor, an excreted serine protease. Our study outline structure and functional aspects of StmPr1, revealing a unique autoproteolytic activity resulting in a shortened version of the active enzyme. We also investigated the potential of two groups of peptide-based inhibitors, one being acetyl- and the other being boron-based inhibitors. The focus here lies on Bortezomib, a boron-based serine protease inhibitor, and its potential therapeutic use against S. maltophilia. We provide a structure-function analysis which includes X-ray crystallography data with resolutions ranging from 1.64 to 2.08 Å, molecular dynamic simulations and small-angle X-ray scattering (SAXS) experiments. These data provide a deeper understanding of StmPr1's resilience and mechanisms, while highlighting the relevance of StmPr1's C-terminal extension for correct folding and its stability. Moreover, it also shows that StmPr1 is promising target for further drug discovery investigations to identify compounds and drugs to treat S. maltophilia infections.
Insights
Multi-resistant Stenotrophomonas maltophilia infections are a growing crisis. This study analyzes StmPr1, a key virulence factor, revealing its structure and potential as a drug target for new therapies.
Area of Science:
- Microbiology
- Structural Biology
- Drug Discovery
Background:
- Multi-resistant Gram-negative bacteria, particularly Stenotrophomonas maltophilia, represent a significant global health threat.
- S. maltophilia is an opportunistic pathogen causing infections in hospital settings, often associated with medical devices and respiratory co-infections, as seen during the COVID-19 pandemic.
- StmPr1, an excreted serine protease, is identified as the primary virulence factor of S. maltophilia.
Purpose of the Study:
- To conduct a detailed structural and functional analysis of the S. maltophilia virulence factor, StmPr1.
- To investigate the autoproteolytic activity of StmPr1 and its implications for enzyme function and stability.
- To evaluate the potential of peptide-based inhibitors, specifically Bortezomib, as therapeutic agents against S. maltophilia infections.
Main Methods:
- X-ray crystallography was employed to determine the structure of StmPr1 at high resolution (1.64–2.08 Å).
- Molecular dynamic simulations and small-angle X-ray scattering (SAXS) experiments were utilized to analyze protein dynamics and structural characteristics.
- Structure-function analyses were performed to understand the role of the C-terminal extension in StmPr1 folding and stability.
Main Results:
- The study revealed a unique autoproteolytic mechanism in StmPr1, leading to a truncated active enzyme.
- The C-terminal extension of StmPr1 was found to be crucial for its proper folding and stability.
- Structural and functional data indicate that StmPr1 is a promising target for developing novel therapeutic strategies.
Conclusions:
- Understanding the structural and functional intricacies of StmPr1 provides critical insights into S. maltophilia pathogenesis.
- The identified autoproteolytic activity and the role of the C-terminal extension offer new avenues for targeting this virulence factor.
- StmPr1 represents a viable target for drug discovery efforts aimed at combating S. maltophilia infections.
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