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Updated: Sep 18, 2025

Modulation of Tau Subcellular Localization as a Tool to Investigate the Expression of Disease-related Genes
Published on: December 20, 2019
Design of an Orally Bioavailable Small Molecule That Modulates the Microtubule-Associated Protein Tau's Pre-mRNA
Peiyuan Zhang1, Amirhossein Taghavi2, Masahito Abe1
1Department of Chemistry, The Scripps Research Institute, 130 Scripps Way, Jupiter, Florida 33458, United States.
Abstract:
Frontotemporal dementia with parkinsonism linked to chromosome 17 (FTDP-17) is caused by the aberrant alternative pre-mRNA splicing of microtubule-associated protein tau (MAPT) exon 10, the inclusion of which encodes a toxic tau protein harboring four microtubule domains (4R tau). Here, we describe the design of an RNA-targeted small molecule that thermodynamically stabilizes the structure of a pre-mRNA splicing regulator element in the MAPT pre-mRNA exon 10-intron 10 junction to reduce the inclusion of exon 10 and hence 4R tau abundance. Structure-guided drug design was used to obtain compounds that form a network of specific interactions to the RNA, including multiple interactions between a single nucleotide (nt) A-bulge and the Hoogsteen face of a closing GC base pair, the latter of which was enabled by the design of base triple interactions. A battery of assays revealed that the compound binds the target in vitro and in cells and affects pre-mRNA splicing in various cellular models, including primary neurons from a human tau (htau) knock-in mouse model. The orally bioavailable compound was administered per os (p.o.), where treatment diminished exon 10 inclusion and reduced the 4R tau protein isoform. Further, the molecule mitigated cellular pathologies and behavioral phenotypes observed in the htau transgenic mouse model. This study provides a potentially general pipeline to design compounds that target RNAs, affect disease pathways, and deliver compounds that have oral bioavailability and blood-brain barrier penetrance.
Insights
Researchers developed an RNA-targeted small molecule to treat frontotemporal dementia with parkinsonism linked to chromosome 17 (FTDP-17). This molecule reduces toxic 4R tau protein by stabilizing a key RNA structure, showing promise for oral administration and brain penetration.
Area of Science:
- Neuroscience
- Molecular Biology
- Drug Discovery
Background:
- Frontotemporal dementia with parkinsonism linked to chromosome 17 (FTDP-17) is associated with aberrant splicing of the MAPT gene, leading to toxic 4R tau protein accumulation.
- Current therapeutic strategies for FTDP-17 are limited, highlighting the need for novel treatment approaches targeting the underlying molecular mechanisms.
Purpose of the Study:
- To design and characterize an RNA-targeted small molecule capable of modulating MAPT pre-mRNA splicing.
- To reduce the inclusion of exon 10 in MAPT pre-mRNA, thereby decreasing the production of toxic 4R tau protein.
- To evaluate the therapeutic potential of the designed molecule in cellular and animal models of FTDP-17.
Main Methods:
- Structure-guided drug design was employed to create small molecules targeting a specific regulatory element in the MAPT pre-mRNA.
- In vitro and cellular assays were used to confirm compound binding to the RNA target and assess its effect on pre-mRNA splicing.
- In vivo studies involved oral administration of the compound to a human tau (htau) knock-in mouse model to evaluate its efficacy and pharmacokinetic properties.
Main Results:
- The designed small molecule demonstrated specific binding to the target RNA structure and effectively reduced exon 10 inclusion in various cellular models, including primary neurons.
- Oral administration of the compound in htau mice led to decreased 4R tau protein levels, mitigated cellular pathologies, and improved behavioral deficits.
- The compound exhibited oral bioavailability and blood-brain barrier penetrance, suggesting its potential for treating neurological disorders.
Conclusions:
- This study presents a novel RNA-targeted small molecule that successfully modulates aberrant tau splicing, offering a potential therapeutic strategy for FTDP-17.
- The findings demonstrate a viable pipeline for designing RNA-targeting compounds with oral bioavailability and CNS penetration for treating neurodegenerative diseases.
- The developed molecule effectively reduced toxic tau species and ameliorated disease phenotypes in a relevant animal model, paving the way for further clinical development.
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