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Updated: Sep 18, 2025

Drug Repurposing Hypothesis Generation Using the "RE:fine Drugs" System
Published on: December 11, 2016
AI-Driven Drug Discovery: A Comprehensive Review
Fábio J N Ferreira1, Agnaldo S Carneiro1
1Universidade Federal do Pará, R. Augusto Corrêa, 01 - Guamá, Belém, Pará 66075-110, Brazil.
Abstract:
Artificial intelligence (AI) and machine learning (ML) offer transformative potential to address the persistent challenges of traditional drug discovery, characterized by high costs, lengthy timelines, and low success rates. This comprehensive review critically analyzes recent advancements (2019-2024) in AI/ML methodologies across the entire drug discovery pipeline, from target identification to clinical development. We examine diverse AI techniques, including deep learning, graph neural networks, and transformers, focusing on their application in key areas such as target identification, lead discovery, hit optimization, and preclinical safety assessment. Our in-depth comparative analysis highlights the advantages, limitations, and practical challenges associated with different AI approaches, emphasizing critical factors for successful implementation such as data quality, model validation, and ethical considerations. The review synthesizes current applications, identifies persistent gapsparticularly in data accessibility, interpretability, and clinical translationand proposes future directions to unlock the full potential of AI in creating safer, more effective, and accessible medicines. By emphasizing transparent methodologies, robust validation, and ethical frameworks, this review aims to guide the responsible and impactful integration of AI into pharmaceutical research and development.
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