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A pathology-attention multi-instance learning framework for multimodal classification of colorectal lesions.
Fanglei Fu1, Xeimei Zhang2, Zhaoxuan Wang3
1Department of Life and Health, Shenzhen International Graduate School, Tsinghua University, Shenzhen, Guangdong, China.
Frontiers in Pharmacology
|June 23, 2025
Summary
This study introduces PAT-MIL, a novel deep learning framework for classifying colorectal cancer whole slide images (WSIs). PAT-MIL enhances diagnostic accuracy by integrating visual features with pathological knowledge, outperforming existing methods.
Area of Science:
- Digital Pathology
- Computational Pathology
- Artificial Intelligence in Medicine
Background:
- Colorectal cancer diagnosis relies on accurate pathological assessment of whole slide images (WSIs).
- Deep learning shows potential but struggles with multimodal diagnostic processes and generalization due to staining variability and tissue heterogeneity.
- Existing weakly supervised methods lack integration of visual features and pathological knowledge.
Purpose of the Study:
- To develop a multimodal weakly supervised learning framework for five-class WSI classification of colorectal cancer.
- To address limitations of current methods by integrating visual analysis with pathological knowledge.
- To improve model generalization across different datasets and mitigate staining variability.
Main Methods:
- Proposed PAT-MIL (Pathology-Attention-MIL), a multimodal weakly supervised learning framework.
- Integrated dynamic attention mechanisms with expert-defined text prototypes for semantic guidance.
- Employed a refinement strategy for adaptive prototype distribution and a loss balancing method for optimizing visual clustering and semantic alignment.
Main Results:
- Achieved 86.45% accuracy (AUC = 0.9624) on an internal five-class dataset, outperforming ABMIL and DSMIL.
- Reached 95.78% and 84.09% accuracy on external datasets CRS-2024 and UniToPatho, respectively.
- Demonstrated superior performance over baseline methods on both internal and external validation sets.
Conclusions:
- PAT-MIL effectively mitigates staining variability and enhances cross-center generalization.
- The framework achieves robust colorectal lesion classification without pixel-level annotations.
- This work advances multimodal pathological image analysis by combining visual and textual data.

