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Updated: Sep 18, 2025

Microbiota Analysis Using Two-step PCR and Next-generation 16S rRNA Gene Sequencing
Published on: October 15, 2019
Biochemical insight into gut microbial imbalance in Covid-19 and post vaccination heart attacks
Mohamed Gamil Mehanna1, Turky Omar Asar2, Habib Changal Mudasir1
1Department of Biochemistry, Faculty of Science, King Abdulaziz University, 21589, Jeddah, Saudi Arabia.
Abstract:
Gut dysbiosis (GD) influences myocardial infarction (MI), by promoting inflammation. Investigating compositional shifts in proinflammatory versus beneficial bacterial taxa may reveal novel biomarkers and therapeutic interventions. This study analysed stool samples from 30 patients who experienced myocardial infarction following COVID-19 infection or vaccination, and 20 healthy controls, using 16S rRNA sequencing to investigate gut microbial imbalances. OTUs were identified, and microbial differences were examined via PCA and PLS-DA to explore biomarkers and interventions. MI patients exhibited reduced Prevotella (17.19% vs. 30% in controls) and elevated Escherichia (16.11% vs.0. 28%), Salmonella (2.58% vs. 0.08%), and Bacteroides (15.91% vs. 8.18%), indicating proinflammatory Microbiota. At phylum level, Firmicutes increased (45.80% vs. 40.87%), Proteobacteria rose (13.27% vs. 9.91%), and beneficial Actinobacteria declined (2.78% vs. 3.67%). PCA showed distinct clustering, confirmed by Partial Least Squares Discriminant Analysis, highlighting heightened inflammation-driving taxa. Although Faecalibacterium appeared variably, it was overall diminished in MI patients, likely fueling immune activation. However, Bifidobacterium (2.06% vs. 2.57%) and Lactobacillus (0.63% v. 0.99%) decreased, compromising intestinal barrier integrity. Females had higher Fusobacterium (1.85% vs. ~ 0%) and Streptococcus (2.28% vs. 0.16%), whereas males exhibited increased Desulfovibrio (1.60% vs. 0.08%) and Akkermansia (1.02% vs. 0.04%). Finally, Enterobacteriaceae surged from 0.41% to 10.04%, exacerbating inflammatory cascades and underscoring dysbiosis in MI pathophysiology. Findings highlights pivotal role of dysbiosis in MI, with elevated proinflammatory bacteria (Escherichia, Salmonella, Proteobacteria) and reduced beneficial SCFA-producing taxa (Bifidobacterium, Lactobacillus) worsening inflammation. Sex-specific microbial alterations, characterized by an enrichment of Fusobacterium and Streptococcus in females and elevated levels of Desulfovibrio and Akkermansia in males, underscore their potential utility as clinical biomarkers for risk stratification. Targeted microbiota therapies can enhance cardiac care outcomes.
Insights
Gut dysbiosis, characterized by an imbalance of gut bacteria, is linked to myocardial infarction (MI). This study found specific bacterial shifts in MI patients, suggesting potential biomarkers and therapeutic targets for heart health.
Area of Science:
- Microbiology
- Cardiology
- Immunology
Background:
- Gut dysbiosis (GD) is increasingly recognized for its role in cardiovascular diseases, particularly myocardial infarction (MI).
- Inflammation driven by gut microbial shifts is a key mechanism linking GD to MI.
- Identifying specific bacterial taxa associated with MI can lead to novel diagnostic and therapeutic strategies.
Purpose of the Study:
- To investigate gut microbial compositional differences between patients with myocardial infarction (MI) post-COVID-19 and healthy controls.
- To identify potential microbial biomarkers for MI risk stratification and therapeutic interventions.
- To explore the role of specific bacterial taxa in promoting inflammation and compromising intestinal barrier integrity in MI.
Main Methods:
- 16S rRNA sequencing was employed to analyze stool samples from 30 MI patients and 20 healthy controls.
- Principal Component Analysis (PCA) and Partial Least Squares Discriminant Analysis (PLS-DA) were used to differentiate microbial profiles.
- Quantitative analysis of bacterial Operational Taxonomic Units (OTUs) and phyla was performed to assess microbial imbalances.
Main Results:
- MI patients showed reduced Prevotella and increased Escherichia, Salmonella, and Bacteroides, indicating a proinflammatory gut microbiota.
- A decrease in beneficial Actinobacteria, Bifidobacterium, and Lactobacillus was observed in MI patients, potentially impairing intestinal barrier function.
- Sex-specific alterations were noted, with females exhibiting higher Fusobacterium and Streptococcus, and males showing increased Desulfovibrio and Akkermansia.
Conclusions:
- Gut dysbiosis plays a pivotal role in MI pathophysiology, with elevated proinflammatory bacteria and reduced beneficial SCFA-producing taxa exacerbating inflammation.
- Sex-specific microbial alterations present potential utility as clinical biomarkers for MI risk stratification.
- Targeted microbiota-based therapies hold promise for improving cardiac care outcomes in patients with MI.
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