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NCT-CXR: Enhancing Pulmonary Abnormality Segmentation on Chest X-Rays Using Improved Coordinate Geometric
Abu Salam1,2,3, Pulung Nurtantio Andono1, Purwanto1
1Faculty of Computer Science, Universitas Dian Nuswantoro, Semarang 50131, Indonesia.
NCT-CXR enhances pulmonary abnormality segmentation in chest X-rays using anatomically constrained data augmentation and expert-guided annotation refinement. This improves precision for conditions like pneumothorax, offering a reliable deep learning solution for radiology.
Area of Science:
- Radiology and Medical Imaging
- Artificial Intelligence in Healthcare
- Computer Vision
Background:
- Medical image segmentation, particularly for chest X-rays (CXRs), faces challenges like class imbalance and inconsistent annotations.
- Accurate identification of pathological regions in CXRs is crucial for diagnosis and treatment planning.
- Existing methods often struggle with the nuances of anatomical variations and subtle abnormalities.
Purpose of the Study:
- To develop NCT-CXR, a novel framework for precise and clinically reliable pulmonary abnormality segmentation in CXRs.
- To improve deep learning model performance by combining anatomically constrained data augmentation with expert-guided annotation refinement.
- To address label noise in large CXR datasets and enhance segmentation accuracy for thoracic conditions.
Main Methods:
- Implemented NCT-CXR framework utilizing discrete-angle rotations (±5°, ±10°) and intensity-based augmentations for data enrichment.
- Employed a clinically validated annotation refinement pipeline with OncoDocAI for generating high-quality, multi-label pixel-level segmentation masks.
- Selected YOLOv8 as the segmentation backbone for its efficiency, speed, and spatial accuracy.
- Utilized NIH Chest X-ray dataset for training and evaluation.
Main Results:
- NCT-CXR significantly improved segmentation precision, notably for pneumothorax (achieving 0.829 and 0.804 Dice scores with ±5° and ±10° rotations, respectively).
- Statistical analysis (Kruskal-Wallis, Nemenyi) confirmed the superiority of discrete-angle augmentation over mixed strategies (p < 0.014).
- The refined annotations and augmentation strategy led to more robust and accurate segmentation masks for nine thoracic conditions.
Conclusions:
- Clinically constrained data augmentation and high-quality annotation are vital for robust medical image segmentation models.
- NCT-CXR provides a practical and high-performance solution for integrating deep learning into radiological workflows.
- The framework demonstrates potential for enhancing diagnostic accuracy and efficiency in CXR analysis.
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