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Coincubation Assay for Quantifying Competitive Interactions between Vibrio fischeri Isolates
Published on: July 22, 2019
Cellvibrio chitinivorans sp. nov., a chitinolytic bacterium isolated from an intertidal mudflat
Yanzhe Xin1, Xing Qin1, Honghai Zhang1
1State Key Laboratory of Animal Nutrition and Feeding, Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing 10093, PR China.
Abstract:
A novel chitinolytic bacterium, designated as NN19T, was isolated from the intertidal mudflat in Leizhou, Guangdong Province, PR China, and subjected to polyphasic taxonomy studies. Strain NN19T is a Gram-negative short rod-shaped bacterium that is motile via a single polar flagellum. Growth occurred at temperatures of 15 °C and 37 °C (optimal 30 °C), pH 6.5-8.0 (optimal pH 7.0) and sodium chloride concentration of 0%-3% (optimal 0.5%-1%). It was identified as a Cellvibrio species based on the results of 16S rRNA gene sequence analysis, and it showed the highest degree of sequence similarity with Cellvibrio fontiphilus MVW-40T (97.87%). The main fatty acids of NN19T were found to be summed feature 3 (C16 : 1 ω7c/C16 : 1 ω6c), C16 : 0 and C18 : 1 ω7c. The polar lipid profile included diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and phospholipid. The respiratory quinone was shown to be ubiquinone-8. Strain NN19T had a genome of 4.46 Mb with a G+C content of 47.82%. The average nucleotide identity and digital DNA-DNA hybridization value between strain NN19T and C. fontiphilus MVW-40T are 75.47% and 20.4%, respectively. Based on phylogenetic analysis and phenotypic data, we concluded that strain NN19T represents a novel species belonging to the genus Cellvibrio, for which the name Cellvibrio chitinivorans sp. nov. is proposed. The type strain is NN19T (=MCCC 1K08847T=KCTC 8393T).
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