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Published on: April 21, 2023
Post-Translational Modifications Orchestrate Repair of Trapped Topoisomerase-Induced DNA Breaks via TDP1 and TDP2
Benu Brata Das1, Saini Basu1, Abhik Sengupta1
1Laboratory of Molecular Biology, School of Biological Sciences, Indian Association for the Cultivation of Science, 2A & B, Raja S. C. Mullick Road, Jadavpur, Kolkata 700032, India.
Abstract:
DNA topoisomerases are critical for maintaining DNA topology and facilitating replication, transcription, and chromatin organization in both nuclear and mitochondrial genomes. When covalently trapped on DNA as topoisomerase cleavage complexes (Topcc's), notably Top1ccs and Top2ccs, these enzymes generate cytotoxic DNA lesions that disrupt genomic integrity and threaten cell viability. Tyrosyl-DNA phosphodiesterase (TDP1 and TDP2) has emerged as key player in the resolution of these lesions, with broader roles in the repair of diverse DNA end structures. Post-translational modifications (PTMs) dynamically regulate the DNA damage response by modulating the activity, localization, and interactions of repair factors. This review provides a comprehensive overview of the mechanisms by which PTMs modulate the activity of Top1 and Top2, and the repair of their covalently trapped complexes. We further delineate how PTMs fine-tune the functional networks of TDP1 and TDP2, enhancing their efficiency in resolving Topccs and preserving genome stability. Together, these insights highlight the multilayered regulatory mechanisms that safeguard genomic integrity and offer potential avenues for therapeutic intervention.
Insights
Post-translational modifications (PTMs) regulate DNA repair enzymes like topoisomerases and TDPs. These modifications are crucial for resolving DNA damage, maintaining genomic stability, and offer therapeutic targets.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- DNA topoisomerases are essential for managing DNA topology during vital cellular processes.
- Trapped topoisomerase-DNA complexes form cytotoxic lesions, threatening genomic integrity.
- Tyrosyl-DNA phosphodiesterases (TDP1 and TDP2) are key enzymes in resolving these DNA lesions.
Purpose of the Study:
- To review how post-translational modifications (PTMs) regulate topoisomerase activity and the repair of trapped complexes.
- To explore the role of PTMs in fine-tuning TDP1 and TDP2 function.
- To highlight regulatory mechanisms for genomic stability and potential therapeutic strategies.
Main Methods:
- Literature review and synthesis of existing research on DNA topoisomerases, TDPs, and PTMs.
- Analysis of mechanisms by which PTMs affect enzyme activity, localization, and interactions.
- Integration of findings to illustrate regulatory networks in DNA repair.
Main Results:
- PTMs dynamically modulate the activity and interactions of topoisomerases (Top1 and Top2) and their cleavage complexes (Topccs).
- PTMs enhance the efficiency of TDP1 and TDP2 in resolving Topccs and other DNA structures.
- These modifications play a critical role in preserving genome stability.
Conclusions:
- PTMs are crucial regulators of the DNA damage response, particularly in the context of topoisomerase-mediated DNA lesions.
- Understanding PTMs' roles in TDP1 and TDP2 function provides insights into maintaining genomic integrity.
- This knowledge opens avenues for developing novel therapeutic interventions targeting DNA repair pathways.
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