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Causal functional mediation analysis with an application to functional magnetic resonance imaging data.
Yi Zhao1, Xi Luo2, Michael E Sobel3
1Department of Biostatistics and Health Data Science, Indiana University School of Medicine, 410 West 10th Street, Indianapolis, IN 46204, USA.
Biostatistics (Oxford, England)
|June 29, 2025
Summary
This study introduces causal mediation analysis for functional data to understand brain connectivity dynamics. It enables estimating individual effect curves in task-based fMRI, offering new insights into brain mechanisms.
Area of Science:
- Neuroscience
- Statistics
- Data Science
Background:
- Task-based functional magnetic resonance imaging (fMRI) aims to quantify effective brain connectivity during stimuli presentation.
- Assessing the dynamic changes in effective connectivity is crucial for understanding brain function.
- Causal mediation analysis is a common tool for exploring mechanisms between stimuli and brain activation, but its application to continuous functional data is limited.
Purpose of the Study:
- To extend causal mediation analysis to functional data, specifically for scenarios with continuous treatment, mediator, and outcome.
- To introduce semiparametric functional linear structural equation models for analyzing dynamic brain connectivity.
- To enable the estimation of individual effect curves in functional data analysis.
Main Methods:
- Development of semiparametric functional linear structural equation models.
- Discussion of causal assumptions pertinent to functional data mediation analysis.
- Application of the proposed models to task-based fMRI data.
Main Results:
- The study successfully applies causal mediation analysis to functional data.
- The developed models allow for the estimation of individual effect curves, providing detailed insights.
- The application to fMRI data offers a novel perspective on dynamic brain connectivity.
Conclusions:
- The proposed semiparametric functional linear structural equation models extend causal mediation analysis to continuous functional data.
- This approach provides a new method for studying dynamic brain connectivity in task-based fMRI.
- An R package (cfma) is available for implementing these novel statistical models.

