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Prospecting Microbial Strains for Bioremediation and Probiotics Development for Metaorganism Research and Preservation
Published on: October 31, 2019
Parerythrobacter aurantius sp. nov., a Member of the Family Erythrobacteraceae Isolated from a Coastal Breakwater
1Key Laboratory of Agricultural Microbiomics and Precision Application (MARA), Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Key Laboratory of Agricultural Microbiome (MARA), State Key Laboratory of Applied Microbiology Southern China, Institute of Microbiology, Guangdong Province, Guangdong Academy of Sciences, Building 66, Xianlie Middle Road 100, Guangzhou, 510070, People's Republic of China.
Abstract:
A novel bacterial isolate designated as strain 1C24T was isolated from a coastal breakwater stone. Its cells were Gram-stain-negative, aerobic, non-motile and rod-shaped. The major cellular fatty acids were summed feature 8 (C18:1 ω6c and/or C18:1 ω7c), iso-C18:0 and C18:1 ω7c 11-methyl; the main polar lipids included diphosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol and sphingoglycolipid; the respiratory quinone was Q-10. The 16S rRNA gene-based analysis demonstrated that strain 1C24T belonged to the family Erythrobacteraceae. The phylogenomic inference revealed that strain 1C24T belonged to the genus Parerythrobacter and formed a separate branch independent from its relatives. The digital DNA-DNA hybridization, average nucleotide identity and amino acid identity values between strain 1C24T and its relatives of the genus Parerythrobacter further indicated that strain 1C24T should represent a putative novel species of this genus. The genomic size and DNA G + C content of strain 1C24T were 2.88 Mbp and 64.85%. The genome analysis demonstrated that strain 1C24T contained a complete photosynthesis gene cluster and a carotenoid biosynthesis gene cluster, and the latter was confirmed by carotenoid detection. Based on genotypic and phenotypic characteristics, strain 1C24T is concluded to represent a novel species of the genus Parerythrobacter within the family Erythrobacteraceae, for which the name Parerythrobacter aurantius sp. nov. is proposed. The type strain is 1C24T (= GDMCC 1.2450T = KCTC 82667T).
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