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Updated: Sep 17, 2025

Evidence-based Knowledge Synthesis and Hypothesis Validation: Navigating Biomedical Knowledge Bases via Explainable AI and Agentic Systems
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Evidence-based Knowledge Synthesis and Hypothesis Validation: Navigating Biomedical Knowledge Bases via Explainable AI and Agentic Systems

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Uncertainty-Aware Graph Neural Networks: A Multihop Evidence Fusion Approach.

Qingfeng Chen, Shiyuan Li, Yixin Liu

    IEEE Transactions on Neural Networks and Learning Systems
    |June 30, 2025
    PubMed
    Summary
    This summary is machine-generated.

    This study introduces an evidence-fusing graph neural network (EFGNN) to address prediction uncertainty in graph neural networks (GNNs). The EFGNN enhances node classification accuracy and quantifies prediction risks for more trustworthy AI.

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    Area of Science:

    • Artificial Intelligence
    • Machine Learning
    • Graph Representation Learning

    Background:

    • Graph neural networks (GNNs) are powerful for graph representation learning but struggle with prediction uncertainty.
    • Uncertainty in class probabilities increases with model depth, leading to unreliable predictions in real-world applications.

    Purpose of the Study:

    • To propose a novel evidence-fusing graph neural network (EFGNN) for trustworthy predictions and enhanced node classification.
    • To explicitly quantify the risk of incorrect predictions by integrating evidence theory with GNNs.

    Main Methods:

    • Developed an evidence-fusing graph neural network (EFGNN) integrating evidence theory with multihop GNNs.
    • Quantified node prediction uncertainty by considering multiple receptive fields.
    • Introduced a parameter-free cumulative belief fusion (CBF) mechanism to enhance prediction trustworthiness.
    • Designed a joint learning objective including evidence cross-entropy, dissonance coefficient, and false confident penalty.

    Main Results:

    • Demonstrated the effectiveness of EFGNN in improving node classification accuracy.
    • Showcased EFGNN's ability to provide trustworthy predictions by quantifying uncertainty.
    • Validated the model's robustness against potential attacks through theoretical analyses and experiments.

    Conclusions:

    • The proposed EFGNN effectively addresses the uncertainty issue in GNNs, leading to more reliable predictions.
    • EFGNN enhances node classification accuracy and provides explicit risk assessment for predictions.
    • The model offers a robust solution for trustworthy AI in graph-based learning scenarios.