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Exploring unsupervised feature extraction algorithms: tackling high dimensionality in small datasets.
Hongqi Niu1, Gabrielle B McCallum2,3, Anne B Chang2,4,5
1Faculty of Science and Technology, Charles Darwin University, Darwin, Northern Territory, 0909, Australia. hongqi.niu@cdu.edu.au.
Unsupervised feature extraction algorithms (UFEAs) effectively reduce dimensionality in small, high-dimensional datasets. This review details eight UFEAs, comparing their mechanisms and performance to guide algorithm selection for improved data analysis.
Area of Science:
- Data Science
- Machine Learning
- Dimensionality Reduction
Background:
- Small datasets with high dimensionality are prevalent due to data collection limits and privacy concerns.
- High dimensionality leads to data sparsity, hindering information extraction and predictive model accuracy.
- Feature extraction algorithms are crucial for reducing dimensionality while preserving essential data information.
Purpose of the Study:
- To provide a comprehensive overview of unsupervised feature extraction algorithms (UFEAs).
- To analyze and compare eight representative UFEAs for their effectiveness on small, high-dimensional datasets.
- To guide the selection of appropriate UFEAs based on their strengths and weaknesses.
Main Methods:
- Focused on unsupervised feature extraction algorithms (UFEAs) for their ability to handle unlabeled high-dimensional data.
- Selected and reviewed eight representative UFEAs: PCA, Classical MDS, Kernel PCA, Isomap, LLE, Laplacian Eigenmaps, ICA, and Autoencoders.
- Theoretically analyzed algorithms based on linearity, manifold, probabilistic, or neural network approaches, detailing working mechanisms, comparisons, and accuracy evaluations.
Main Results:
- Detailed theoretical backgrounds and working mechanisms of eight selected UFEAs were presented.
- Algorithms were classified and compared based on transformation approach, goals, parameters, and computational complexity.
- Performance evaluation on various datasets highlighted the strengths and weaknesses of each UFEA for specific scenarios.
Conclusions:
- UFEAs are vital for addressing dimensionality challenges in small, high-dimensional datasets.
- The review offers a systematic comparison of UFEAs, aiding researchers in choosing the most suitable algorithm.
- Understanding the nuances of each UFEA enables more effective data analysis and improved predictive modeling.
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