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Updated: May 5, 2026

Formation of Ordered Biomolecular Structures by the Self-assembly of Short Peptides
Published on: November 21, 2013
Substitution of tyrosine with electron-deficient aromatic amino acids improves Ac-PHF6 self-assembly and
Shubhangini Singh Verma1, Nitin Chaudhary1
1a, Department of Biosciences and Bioengineering, Indian Institute of Technology Guwahati Guwahati 781 039 India chaudhary@iitg.ac.in +91-361-2582249 +91-361-2582224.
Abstract:
The hexapeptide PHF6 (VQIVYK), an amyloidogenic peptide stretch from human tau, self-assembles via parallel in-register β-sheet formation, wherein Tyr residues are involved in aromatic stacking interactions. Ac-PHF6 (CH3CO-VQIVYK-NH2) forms a viscous solution in water but causes instant gelation of PBS and cell culture media. Aromatic substitutions have been reported in the literature to modulate the self-assembly of peptides. In this study, we perturbed the electronic properties of the sole aromatic residue in Ac-PHF6 and studied hydrogelation. The Tyr residue was substituted with Phe, and the phenyl moiety was then substituted with various electron-withdrawing groups at the para position. All peptides caused PBS gelation with comparable rheological properties. The structures underlying the hydrogels were β-sheet fibrils. The electron-deficient aromatic moieties improved self-assembly and hydrogelation. Ac-PHF6 and no other aromatic analog except the one having p-(trifluoromethyl)phenylalanine caused the gelation of deionized water. Water gelation caused by the p-(trifluoromethyl)phenylalanine-containing analog is likely hydrophobicity-driven.
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