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Quantum chemical modeling, molecular docking, and ADMET evaluation of imidazole phenothiazine hybrids
Deepanjali Shukla1, Iqbal Azad1, Sabahat Yasmeen Sheikh1
1Department of Chemistry, Integral University, Dasauli, P.O. Bas-ha, Kursi Road, Lucknow, UP, 226026, India.
Abstract:
Cancer is one of the biggest challenges for health concerns in the world. There are so many drugs available, but they have a lack of specificity, poor safety, side effects, and the development of resistance. Therefore, there is an urgent need for much safer and more targeted anticancer treatments. Nitrogen-containing heterocycles play an important role in the development of drugs. Recently, imidazole and phenothiazine rings are well known for their antiproliferative and anticancer activities. This study employs the molecular hybridisation method to link these bioactive scaffolds and develop novel N-substituted imidazole-phenothiazine (N-IPTZ) hybrids. All the synthesised hybrids were characterised by using analytical techniques such as 1H-NMR,13C-NMR, mass spectrum, and FT-IR. Furthermore, the DFT analysis under the B3LYP/6-311G(d, p) level in gas phase to optimise and correlate the structures of the synthesised hybrids was also performed. The optimised structure was used to determine the energies of frontier molecular orbitals (HOMO-LUMO), quantum chemical descriptors (QCD), and molecular electrostatic potentials (MEP). Additionally, in silico approaches such as ADMET, BOILED-Egg, and bioactivity radar were also performed to evaluate the oral bioavailability of the synthesised hybrids. Molecular docking and MD simulation studies were also conducted to assess the interaction profile of the synthesised hybrids with cancer target receptors like EGFR, IGF, VEGFR1, VEGFR2, and PARP-2. It was found through docking studies that the synthesised N-IPTZ(a-c) hybrids might interact with amino acids such as GLY695, SER696, GLY697, ALA698, PHE699, LYS721, GLY772, CYS773, THR766, GLN767, LEU768, MET769, ARG817, ASN818, and THR830. Additionally, it reveals hydrogen bonding with ASP831, with binding energies of - 7.23, - 6.11, and - 5.93 kcal/mol. Moreover, all the synthesised hybrids were also analysed for their anti-cancer activity against the human liver cancer cell line (HepG2) by MTT assay. Obtained results revealed that N-IPTZ(c) exhibited anticancer activity with an IC50 value of 35.3 µg/mL.
Insights
This study developed novel N-substituted imidazole-phenothiazine (N-IPTZ) hybrids for targeted cancer therapy. Hybrid N-IPTZ(c) showed promising anticancer activity against liver cancer cells, offering a safer alternative to existing treatments.
Area of Science:
- Medicinal Chemistry
- Computational Chemistry
- Pharmacology
Background:
- Cancer presents a significant global health challenge, with current treatments often lacking specificity and causing adverse effects.
- Nitrogen-containing heterocycles, specifically imidazole and phenothiazine scaffolds, are recognized for their potential anticancer properties.
- There is a critical need for developing safer, more targeted anticancer agents.
Purpose of the Study:
- To synthesize and characterize novel N-substituted imidazole-phenothiazine (N-IPTZ) hybrids.
- To evaluate the anticancer potential and pharmacokinetic properties of these novel hybrids.
- To investigate the molecular interactions of the hybrids with key cancer-related targets.
Main Methods:
- Molecular hybridization of imidazole and phenothiazine scaffolds.
- Comprehensive characterization using NMR, mass spectrometry, and FT-IR.
- DFT calculations for structural optimization and quantum chemical analysis.
- In silico ADMET, BOILED-Egg, and bioactivity radar for oral bioavailability assessment.
- Molecular docking and MD simulations against cancer targets (EGFR, IGF, VEGFR1/2, PARP-2).
- In vitro anticancer activity evaluation using MTT assay on HepG2 liver cancer cell line.
Main Results:
- Novel N-IPTZ hybrids were successfully synthesized and characterized.
- DFT analysis provided insights into electronic structures and reactivity.
- In silico studies predicted favorable pharmacokinetic profiles for some hybrids.
- Molecular docking revealed significant interactions with cancer target receptors, including specific amino acid residues and binding energies.
- Hybrid N-IPTZ(c) demonstrated notable in vitro anticancer activity against HepG2 cells with an IC50 of 35.3 µg/mL.
Conclusions:
- The synthesized N-IPTZ hybrids represent a promising class of compounds for anticancer drug development.
- N-IPTZ(c) exhibits significant anticancer potential, warranting further investigation.
- The combination of computational and experimental approaches provides a robust platform for designing novel anticancer agents.
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