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Updated: Sep 17, 2025

Determining the Likelihood of Variant Pathogenicity Using Amino Acid-level Signal-to-Noise Analysis of Genetic Variation
Published on: January 16, 2019
Novel Pathogenic Variant Confirms the Association of REST and Jones Syndrome.
Valentina Lodato1, Massimo Galli2, Giacomo D'Angeli2
1Department of Experimental Medicine, Division of Medical Genetics, San Camillo-Forlanini Hospital, Rome, Italy.
Jones syndrome (JS) is a rare genetic disorder causing gingival fibromatosis and hearing loss. This study confirms that mutations in the REST gene
Area of Science:
- Genetics
- Rare Diseases
- Molecular Biology
Background:
- Jones syndrome (JS) is an ultra-rare autosomal dominant disorder.
- JS is characterized by gingival fibromatosis and progressive sensorineural hearing loss.
- Previous research linked JS to the repressor element 1-silencing transcription factor (REST) gene in a Finnish family.
Purpose of the Study:
- To investigate the genetic basis of Jones syndrome in an Italian family.
- To confirm the role of the REST gene in the etiology of JS.
Main Methods:
- Exome sequencing was performed on affected and unaffected family members.
- Segregation analysis of identified variants within the family.
Main Results:
- A heterozygous pathogenic variant (c.2645T>G, p.Leu882*) in exon 5 of the REST gene was identified in the Italian proband and her mother.
- This variant was absent in unaffected family members, confirming co-segregation with JS.
- This finding supports the role of REST gene variants in causing Jones syndrome.
Conclusions:
- The study confirms that heterozygous variants in exon 5 of the REST gene are causative of Jones syndrome.
- This expands the understanding of JS genetics beyond the previously reported Finnish family.
- Identifies a specific pathogenic variant in the REST gene associated with JS.
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