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Updated: Sep 17, 2025

Assessing Cellular Target Engagement by SHP2 PTPN11 Phosphatase Inhibitors
Published on: July 17, 2020
Discovery of SA-8 as a potent SHP2-AUTAC degrader in cancer therapy
Haoze Song1, Xiaoxue Zou2, Jing Liang1
1Wuya College of Innovation, Key Laboratory of Structure-Based Drug Design & Discovery, Ministry of Education, Shenyang Pharmaceutical University, Shenyang, 110016, China.
Abstract:
Src homology region 2-containing phosphatase 2 (SHP2) is overexpressed in various cancers and suppresses immune function while promoting tumor immune escape by regulating intracellular signaling pathways. Currently, the primary therapeutic strategies targeting SHP2 focus on inhibiting its catalytic activity or reducing its expression levels. However, SHP2 allosteric inhibitors face challenges in terms of efficacy, safety, and developmental difficulty when used as monotherapy. Consequently, several SHP2-PROTAC molecules have been developed. Given the limited substrate spectrum of ubiquitin-proteasome systems, we propose that autophagy-based degradation strategies possess greater advantages. Using SHP099 as the ligand of the protein of interest (POI), we designed and synthesized two series of SHP2-AUTACs. Among these, SA-8 demonstrated the optimal biological activity, showing significant antitumor activity and potent SHP2 degradation capability. Mechanistic studies revealed that SA-8 induced SHP2 degradation through ternary complex formation with both SHP2 and LC3, ultimately activating the autophagy-lysosome pathway. It was found that SA-8 can dose-dependently induce apoptosis in HeLa cells. This work not only validates the practical utility of the AUTAC strategy but also offers a promising therapeutic approach for developing next-generation target degraders.
Insights
Scientists developed novel autophagy-targeting chimeras (AUTACs) to degrade Src homology region 2-containing phosphatase 2 (SHP2), a key protein in cancer. SA-8 effectively reduced SHP2 levels, suppressed tumor growth, and induced cancer cell apoptosis, offering a new therapeutic avenue.
Area of Science:
- Oncology
- Molecular Biology
- Drug Discovery
Background:
- Src homology region 2-containing phosphatase 2 (SHP2) is overexpressed in cancers, promoting tumor growth and immune evasion.
- Current SHP2 inhibitors have limitations in efficacy, safety, and development.
- Autophagy-based degradation offers potential advantages over ubiquitin-proteasome systems for targeted protein removal.
Purpose of the Study:
- To design and synthesize novel SHP2-targeting autophagy-based chimeric molecules (AUTACs).
- To evaluate the efficacy of SHP2-AUTACs in degrading SHP2 and exhibiting antitumor activity.
- To elucidate the mechanism of action for SHP2 degradation via autophagy.
Main Methods:
- Design and synthesis of two series of SHP2-AUTACs using SHP099 as the ligand.
- Assessment of biological activity, including SHP2 degradation and antitumor effects.
- Mechanistic studies involving ternary complex formation and autophagy-lysosome pathway activation.
Main Results:
- SA-8, a lead SHP2-AUTAC, demonstrated potent SHP2 degradation and significant antitumor activity.
- SA-8 induced SHP2 degradation by forming a ternary complex with SHP2 and LC3, activating autophagy.
- SA-8 dose-dependently induced apoptosis in HeLa cancer cells.
Conclusions:
- The AUTAC strategy is a viable approach for targeted protein degradation.
- SA-8 represents a promising next-generation therapeutic candidate for SHP2-driven cancers.
- SHP2-AUTACs offer a novel therapeutic strategy for cancer treatment by hijacking the autophagy pathway.
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