Related Experiment Video
Updated: Sep 17, 2025

Targeted RNA Sequencing Assay to Characterize Gene Expression and Genomic Alterations
Published on: August 4, 2016
Prevalence of targetable genomic alterations among a diverse population participating in the ASCO TAPUR Study
Pam K Mangat1, M Kelsey Kirkwood2, Dominique C Hinshaw2
1American Society of Clinical Oncology, Alexandria, VA, USA. TAPURPublications@asco.org.
Abstract:
The Targeted Agent and Profiling Utilization (TAPUR) Study (NCT02693535, registered on February 23, 2016) is a phase II basket trial evaluating the antitumor activity of commercially available targeted agents in patients with advanced cancers harboring genomic alterations known to be drug targets. We analyzed the prevalence of targetable gene alterations in the diverse population of patients participating in this study. We assessed 978 gene alterations or other biomarkers across sex, age, race, ethnicity, BMI category, smoking status, Eastern Cooperative Oncology Group performance status, and cancer type in 3448 registrants. We report a higher prevalence of genomic targets of FDA-approved therapies for various cancers, including PDGRFA in Hispanic versus non-Hispanic registrants and JAK2 in Asian versus White registrants. This study reinforces the importance of recruiting diverse populations of patients to clinical trials and provides evidence that may inform the development of strategic treatment plans that consider patient demographics in addition to tumor characteristics. Clinicaltrials.gov NCT02693535.
Insights
The Targeted Agent and Profiling Utilization (TAPUR) study found that specific gene alterations, like PDGRFA and JAK2, are more common in certain ethnic groups. This highlights the need for diverse patient populations in clinical trials for tailored cancer treatments.
Area of Science:
- Oncology
- Genomics
- Clinical Trials
Background:
- The Targeted Agent and Profiling Utilization (TAPUR) Study (NCT02693535) is a Phase II basket trial.
- It evaluates targeted therapies in advanced cancers with known drug targets.
- Understanding genomic alterations across diverse populations is crucial for effective treatment.
Purpose of the Study:
- To analyze the prevalence of targetable gene alterations in a diverse patient cohort.
- To investigate the association of these alterations with demographic factors.
- To inform the development of personalized cancer treatment strategies.
Main Methods:
- Analysis of 978 gene alterations and biomarkers in 3448 registrants.
- Assessment across various demographic factors including sex, age, race, ethnicity, BMI, smoking status, performance status, and cancer type.
- Utilized data from the TAPUR Study (ClinicalTrials.gov NCT02693535).
Main Results:
- Identified higher prevalence of PDGRFA in Hispanic versus non-Hispanic registrants.
- Observed higher prevalence of JAK2 in Asian versus White registrants.
- Demonstrated demographic variations in the occurrence of targetable genomic alterations.
Conclusions:
- Recruiting diverse patient populations to clinical trials is essential.
- Genomic target prevalence varies significantly across different demographic groups.
- Treatment strategies may benefit from integrating patient demographics with tumor characteristics.
More Related Videos
13:24Integration of Wet and Dry Bench Processes Optimizes Targeted Next-generation Sequencing of Low-quality and Low-quantity Tumor Biopsies
Published on: April 11, 2016
10:27Testing Targeted Therapies in Cancer using Structural DNA Alteration Analysis and Patient-Derived Xenografts
Published on: July 25, 2020
Related Concept Videos
Genome-wide Association Studies-GWAS
GWAS does not require the identification of the target gene involved in...
Targeted Cancer Therapies
There are several types of targeted therapies against...
Cancers Originate from Somatic Mutations in a Single Cell