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MTMedFormer: multi-task vision transformer for medical imaging with federated learning
Anirban Nath1, Sneha Shukla2, Puneet Gupta2
1Department of Computer Science and Engineering, Indian Institute of Technology Indore, Indore, 453552, Madhya Pradesh, India. ms2104101001@iiti.ac.in.
Medical & Biological Engineering & Computing
|July 8, 2025
Summary
This study introduces MTMedFormer, a transformer-based model for multi-task medical imaging. It effectively addresses data scarcity and privacy concerns, outperforming existing methods in diagnostic tasks and image segmentation.
Area of Science:
- Artificial Intelligence
- Medical Imaging
- Computer Vision
Background:
- Deep learning significantly enhances medical imaging analysis but faces challenges with large dataset requirements and data privacy.
- Existing multi-task learning (MTL) models struggle with global feature contextualization, while federated learning (FL) methods face difficulties in aggregating stable feature maps.
Purpose of the Study:
- To propose MTMedFormer, a novel transformer-based model for multi-task medical imaging.
- To address data scarcity and privacy issues in training diagnostic models.
- To improve the aggregation of multi-task imaging models in a federated setting.
Main Methods:
- Developed MTMedFormer, a transformer architecture with a shared encoder for task-agnostic features and task-specific decoders.
- Integrated multi-task learning with a hybrid loss function for synergistic task learning.
- Introduced a novel Bayesian federation method for aggregating multi-task imaging models.
Main Results:
- MTMedFormer demonstrated superior performance compared to single-task and traditional MTL models on mammogram and pneumonia datasets.
- The proposed Bayesian federation method achieved better results in image segmentation than conventional aggregation techniques.
- The model effectively learns distinct diagnostic tasks synergistically.
Conclusions:
- MTMedFormer offers a robust solution for multi-task medical image analysis, overcoming limitations of previous approaches.
- The developed Bayesian federation method enhances collaborative model training without compromising data privacy.
- This work advances the application of deep learning in medical imaging by enabling efficient and private collaborative learning.

