Enhanced G-Quadruplex Stability and Anticancer Activity of N2-Aryl Deoxyguanosine-Modified T40214 Oligonucleotides
Nishant Kumar Choudhary1, Swrajit Nath Sharma2, Gourav Das1
1Department of Chemistry, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal 721302, India.
Abstract:
Signal transducer and activator of transcription 3 (Stat3) is a key molecular target in many cancers due to its role in tumor cell proliferation and survival. T40214, a G-quadruplex (G4) forming oligonucleotide, targets the Stat3 dimer and inhibits its DNA binding activity. In this study, we introduced N2-furfuryl and N2-cinnamyl deoxyguanosine modifications at the G-tetrad positions in T40214 to assess their structural and antitumor effects in prostate cancer cells. A single N2-furfuryl/cinnamyl modification preserved the stable parallel G4 conformation. Incorporating either of these modifications into the top G-quartet (TF15 and TC15) significantly enhanced thermal stability. Molecular dynamics simulation studies revealed that the aryl moieties were well accommodated at the 5'-ends without disrupting the interaction with Stat3. It is also evident that H-bonding and π-π stacking interactions induced due to the presence of the aryl moieties contributed to the improved thermal stabilities for TF15 and TC15, respectively. Gel mobility assays confirmed that all aryl-modified T40214 G4s form stable 5'-5' dimers, similar to native T40214. TF15 and TC15 derivatives exhibited potent antiproliferative activity (IC50 = 0.37-0.39 μM) and effectively induced apoptosis while suppressing the Stat3-mediated gene expressions in DU145 cells. Overall, these findings demonstrate the potential of these aryl modifications in T40214 as a promising Stat3-targeting therapeutic approach for prostate cancers.
Insights
Modified T40214 oligonucleotides with aryl groups show potent antitumor effects against prostate cancer. These TF15 and TC15 compounds inhibit Signal transducer and activator of transcription 3 (Stat3) and induce cancer cell death.
Area of Science:
- Biochemistry
- Molecular Biology
- Oncology
Background:
- Signal transducer and activator of transcription 3 (Stat3) is crucial for cancer cell proliferation and survival, making it a key therapeutic target.
- G-quadruplex (G4) forming oligonucleotides, like T40214, can inhibit Stat3 DNA binding activity.
- Developing novel Stat3 inhibitors is essential for advancing prostate cancer treatment.
Purpose of the Study:
- To synthesize and characterize novel T40214 derivatives with N2-furfuryl and N2-cinnamyl modifications at G-tetrad positions.
- To evaluate the structural integrity, thermal stability, and Stat3 interaction of these modified G4 oligonucleotides.
- To assess the in vitro antitumor efficacy, including antiproliferative and pro-apoptotic effects, in prostate cancer cells.
Main Methods:
- Chemical synthesis of N2-furfuryl and N2-cinnamyl modified deoxyguanosine.
- Structural analysis using gel mobility assays and molecular dynamics simulations.
- Antiproliferative and apoptosis assays in DU145 prostate cancer cells, along with gene expression analysis.
Main Results:
- Single N2-aryl modifications maintained the parallel G4 conformation.
- TF15 and TC15 modifications significantly enhanced thermal stability and were well-accommodated at the 5'-ends.
- Aryl-modified T40214 derivatives formed stable 5'-5' dimers and demonstrated potent antiproliferative activity (IC50 = 0.37-0.39 μM) and apoptosis induction.
- TF15 and TC15 suppressed Stat3-mediated gene expression in DU145 cells.
Conclusions:
- N2-aryl modifications in T40214 G4 oligonucleotides enhance structural stability and antitumor potency.
- TF15 and TC15 represent promising Stat3-targeting agents for prostate cancer therapy.
- These findings support the development of modified G4 oligonucleotides as a novel therapeutic strategy for Stat3-driven cancers.
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