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Updated: Sep 16, 2025

Digital PCR-based Competitive Index for High-throughput Analysis of Fitness in Salmonella
Published on: May 13, 2019
Temporal tuning of switch-like virulence expression resolves environmental uncertainty through phenotypic
Madison Spratt1,2, Keara Lane2,3
1Interdisciplinary Biological Sciences Graduate Program, Northwestern University, Evanston, Illinois, 60208, USA.
Salmonella Typhimurium tunes virulence gene expression probabilistically. This strategy helps bacteria adapt to uncertain host environments by adjusting responses to intracellular conditions.
Area of Science:
- Microbiology
- Bacterial Pathogenesis
- Gene Regulation
Background:
- Gene regulatory networks adapt to environmental uncertainty, with stimuli rarely being precise.
- Intracellular bacterial pathogens face dynamic, hostile host environments, shaping virulence gene regulation.
- Salmonella Pathogenicity Island 2 (SPI-2) is crucial for Salmonella Typhimurium's intracellular replication.
Purpose of the Study:
- To investigate if Salmonella Typhimurium (STm) tunes SPI-2 transcriptional responses to intracellular-like environments.
- To evaluate the capacity for probabilistic gene expression in response to environmental cues.
Main Methods:
- Utilized live-cell reporters and single-molecule fluorescence in situ hybridization (smFISH).
- Conducted experiments in in vitro inducing environments mimicking intracellular conditions.
- Analyzed single-cell transition dynamics, growth rates, and lineage.
Main Results:
- Identified bimodal expression of SPI-2 in clonal populations, with cells progressively transitioning to an expressing state.
- Demonstrated that transition timing varies across generations and is modulated by signal strength and growth rate.
- Linked SPI-2 heterogeneity to SsrA signaling and SsrB concentration, revealing switch-like activation dynamics.
Conclusions:
- STm probabilistically tunes the fraction of SPI-2 expressing cells based on perceived intracellular environment likelihood.
- This strategy resolves uncertainty in ambiguous environments, enhancing bacterial survival and virulence.
- Single-cell responses are linked to cell growth and lineage, providing insights into adaptive mechanisms.
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