Advancing Seabird Diet Studies Through Buccal Swabbing for DNA Metabarcoding
Lauren G Evans1, Stephanie M Harris2,3, Paul M Thompson4
1School of Environmental and Natural Sciences Bangor University Bangor UK.
Ecology and Evolution
|July 10, 2025
Summary
Buccal swabbing combined with DNA metabarcoding offers a minimally invasive method for analyzing pelagic seabird diets. This technique provides valuable insights into Manx shearwater and northern fulmar feeding habits, crucial for conservation.
Area of Science:
- Marine Ecology
- Avian Biology
- Conservation Science
Background:
- Seabirds act as indicators of ocean health, necessitating accurate dietary studies for ecological understanding and conservation.
- Traditional methods for determining pelagic seabird diets face limitations, especially for wide-ranging species.
- Understanding seabird diets is vital for monitoring marine trophic webs and detecting ecosystem changes.
Purpose of the Study:
- To evaluate buccal swabbing and DNA metabarcoding as a combined, minimally invasive method for seabird diet analysis.
- To determine the diet of Manx shearwaters (Puffinus puffinus) and northern fulmars (Fulmarus glacialis) during the breeding season.
- To assess the utility of this method for informing conservation and detecting ecosystem shifts.
Main Methods:
- Investigated buccal swabbing coupled with DNA metabarcoding.
- Sampled Manx shearwaters and northern fulmars at different breeding stages.
- Analyzed amplified prey DNA to identify fish taxa in collected samples.
Main Results:
- Detected 14 fish taxa; prey DNA amplified in 68% of Manx shearwater and 28% of northern fulmar samples.
- Provided first species-level dietary data for chick-provisioning Manx shearwaters, indicating reliance on European sprat (Sprattus sprattus).
- Identified new prey taxa for northern fulmars, including fishery discard species, highlighting their dietary importance.
Conclusions:
- Buccal swabbing and DNA metabarcoding is a viable, minimally invasive tool for pelagic seabird dietary analysis.
- Manx shearwaters and northern fulmars may be sensitive to changes in prey availability and fishing activities.
- Dietary data supports informed conservation strategies for these seabird populations and marine ecosystems.


