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B4GALT3 as a Key Glycosyltransferase Gene in Multiple Myeloma Progression: Insights From Bioinformatics, Machine
Apeng Yang1,2, Mengying Ke3, Lin Feng1,2
1Department of Hematology, The First Affiliated Hospital of Fujian Medical University, Fuzhou, China.
Abstract:
Glycosylation abnormalities are critical in the progression of various cancers. However, their role in the onset and prognosis of multiple myeloma (MM) remains underexplored. This study aims to identify glycosyltransferase (GT)-related biomarkers and investigate their underlying mechanisms in MM. GT-related genes were extracted from the MMRF-CoMMpass and GSE57317 data sets. Potential biomarkers were identified using Cox regression and Lasso analyses. A glycosyltransferase-related prognostic model (GTPM) was developed by evaluating 113 machine learning algorithm combinations. The expression of B4GALT3, a key gene identified through this model, was analyzed in MM bone marrow samples using immunohistochemistry, quantitative PCR, and Western blot. Functional roles of B4GALT3 in MM cell behavior were assessed through knockdown experiments, and its mechanism of action was investigated. The GTPM stratified MM patients into high- and low-risk groups, with significantly better survival in the low-risk group (HR = 55.94, 95% CI = 40.48-77.31, p < 0.001). The model achieved AUC values of 0.98 and 0.99 for 1- and 3-year overall survival, outperforming existing gene signatures (including EMC92, UAMS70, and UAMS17). B4GALT3 expression was significantly elevated in advanced MM stages (p < 0.001) and correlated with poorer survival. Knockdown of B4GALT3 reduced MM cell proliferation, invasion, and increased apoptosis. Mechanistic analyses revealed that B4GALT3 modulates MM cell behavior via the Wnt/β-catenin/GRP78 pathway, primarily by regulating endoplasmic reticulum (ER) stress. This study developed a novel GTPM for predicting survival in MM and identified B4GALT3 as a key gene influencing disease progression. Experimental evidence highlights B4GALT3's role in modulating ER stress and Wnt/β-catenin pathways, positioning it as a potential prognostic biomarker and therapeutic target in MM.
Insights
This study identifies a novel glycosyltransferase-related prognostic model (GTPM) for multiple myeloma (MM) that accurately predicts patient survival. The key gene B4GALT3 influences MM progression by regulating endoplasmic reticulum stress and Wnt/β-catenin pathways.
Area of Science:
- Oncology
- Molecular Biology
- Biochemistry
Background:
- Glycosylation abnormalities are implicated in cancer progression.
- The role of glycosyltransferase (GT) in multiple myeloma (MM) onset and prognosis is not well understood.
Purpose of the Study:
- To identify GT-related biomarkers for MM.
- To develop a prognostic model for MM using GT-related genes.
- To elucidate the functional mechanisms of identified biomarkers in MM.
Main Methods:
- Utilized MMRF-CoMMpass and GSE57317 datasets to extract GT-related genes.
- Applied Cox regression and Lasso analyses for biomarker identification.
- Developed a glycosyltransferase-related prognostic model (GTPM) using machine learning.
- Validated B4GALT3 expression and function in MM cells via IHC, qPCR, Western blot, and knockdown experiments.
Main Results:
- The GTPM effectively stratified MM patients into high- and low-risk groups, demonstrating significantly better survival in the low-risk group (HR=55.94, p<0.001).
- The GTPM achieved high AUC values (0.98 for 1-year, 0.99 for 3-year survival), outperforming existing signatures.
- Elevated B4GALT3 expression correlated with advanced MM stages and poorer survival; its knockdown reduced MM cell proliferation and invasion while increasing apoptosis.
- B4GALT3 was found to modulate MM cell behavior through the Wnt/β-catenin/GRP78 pathway by regulating endoplasmic reticulum (ER) stress.
Conclusions:
- A novel GTPM was developed, offering a robust tool for predicting survival in multiple myeloma patients.
- B4GALT3 is identified as a key gene in MM progression, acting via ER stress and Wnt/β-catenin pathways.
- B4GALT3 presents potential as a prognostic biomarker and therapeutic target for multiple myeloma.
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