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Updated: Sep 15, 2025

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Automated Segmentation of Cortical Grey Matter from T1-Weighted MRI Images
Published on: January 7, 2019
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AI-enabled precise brain tumor segmentation by integrating Refinenet and contour-constrained features in MRI images
Cheng Lv1, Xu-Jun Shu2, Jun Qiu3
1School of Mathematics and Computer Sciences, Nanchang University, Nanchang, Jiangxi Province, China.
Medical Physics
|July 15, 2025
Summary
The SAM-RCCF framework enhances medical image segmentation for brain tumors, significantly improving accuracy and robustness over the original Segment Anything Model (SAM). This advancement aids in analyzing complex intracranial tumor MRI scans.
Area of Science:
- Medical image analysis
- Deep learning for medical imaging
- Transformer-based models in healthcare
Background:
- Medical image segmentation is crucial across various medical fields.
- The Segment Anything Model (SAM) shows promise but struggles with medical image complexities like variable styles and unclear boundaries.
- Direct application of SAM to medical imaging is limited by these challenges.
Purpose of the Study:
- To improve the Segment Anything Model (SAM) for medical image segmentation.
- Introduce the SAM-RCCF framework to enhance robustness and generalizability for intracranial tumors.
- Improve segmentation precision for gliomas, metastatic tumors, and meningiomas.
Main Methods:
- Utilized 484 T1CE-weighted MRI scans from brain tumor patients (glioma, metastatic, meningioma).
- Developed the SAM-RCCF framework integrating RefineNet and conditional control for precise feature recognition.
- Employed five-fold cross-validation for performance evaluation.
Main Results:
- SAM-RCCF achieved high performance in glioma segmentation (IOU: 0.90, DSC: 0.912) and meningioma segmentation (IOU: 0.9214, DSC: 0.93).
- The model significantly outperformed classic segmentation models on these tasks.
- Demonstrated superior segmentation accuracy and robustness on complex brain tumor MRI data.
Conclusions:
- The SAM-RCCF algorithm significantly surpasses the original SAM in segmenting brain tumors (glioma, metastatic, meningioma).
- Validated the framework's effectiveness for complex and variable medical images.
- Enhanced segmentation accuracy and robustness in medical image analysis.

