Phosphorylation-inducing chimera rewires oncogenic kinase to trigger apoptosis
Manuel L Merz1, Veronika M Shoba1, Rajaiah Pergu1,2,3
1Chemical Biology and Therapeutics Science Program, Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.
Abstract:
Hyperactive enzymes drive the pathology of several diseases, and classically, "occupancy-driven" drugs (e.g., active site or allosteric inhibitors) are used to target these enzymes. However, the stoichiometric nature of such inhibitors and the emergence of resistance highlight the need for new modalities. Here, we report a Phosphorylation-Inducing Chimeric Small molecule (PHICS) that rewires the hyperactivity of an oncogenic kinase, BCR-ABL, to phosphorylate its active site residue. Molecular dynamics simulations suggest this phosphorylation inhibits BCR-ABL by inducing electrostatic rearrangements of its active site. This "event-driven" mechanism selectively induces apoptosis of BCR-ABL-dependent cancer cells at substoichiometric concentrations (vs. stoichiometric concentrations of occupancy-driven drugs). Furthermore, PHICS is effective on other oncogenic ABL fusions or clinically observed resistance mutations, including to occupancy-driven drugs with the same binding site as PHICS, pointing to the orthogonality of their resistance mechanisms. These studies lay the foundation for electric-field and "event-driven" modalities to control hyperactive enzymes with orthogonal resistance mechanisms to occupancy-driven modalities.
Insights
Researchers developed a novel Phosphorylation-Inducing Chimeric Small molecule (PHICS) to control hyperactive enzymes like BCR-ABL. This event-driven approach offers a new strategy against cancer, overcoming resistance to traditional drugs.
Area of Science:
- Biochemistry
- Molecular Biology
- Drug Discovery
Background:
- Hyperactive enzymes are implicated in numerous diseases.
- Current drugs (occupancy-driven inhibitors) face challenges like stoichiometric requirements and resistance.
- Novel therapeutic modalities are needed to target enzyme hyperactivity.
Purpose of the Study:
- To introduce a new class of drugs called Phosphorylation-Inducing Chimeric Small molecules (PHICS).
- To investigate the mechanism of PHICS in inhibiting the oncogenic kinase BCR-ABL.
- To evaluate the efficacy of PHICS against drug-resistant mutations and other oncogenic fusions.
Main Methods:
- Design and synthesis of Phosphorylation-Inducing Chimeric Small molecule (PHICS).
- Utilizing molecular dynamics simulations to elucidate the inhibition mechanism.
- In vitro testing of PHICS against BCR-ABL-dependent cancer cells and resistance mutations.
Main Results:
- PHICS effectively inhibits BCR-ABL by inducing phosphorylation of its active site residue.
- This phosphorylation event triggers electrostatic rearrangements, leading to enzyme inhibition.
- PHICS demonstrates efficacy against various BCR-ABL fusions and resistance mutations, with orthogonal resistance mechanisms.
- The event-driven approach shows selective apoptosis induction in cancer cells at substoichiometric concentrations.
Conclusions:
- PHICS represents a novel "event-driven" therapeutic modality for controlling hyperactive enzymes.
- This approach offers an alternative to traditional "occupancy-driven" drugs, overcoming resistance.
- The findings lay the groundwork for developing electric-field and event-driven therapies with orthogonal resistance profiles.
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