Related Experiment Video
Updated: Jul 14, 2026

Multi-Fiber Photometry to Record Neural Activity in Freely-Moving Animals
Published on: October 20, 2019
Axonal correlates of striatal calcium transients measured by fiber photometry
David M Lipton1, Mohammad Tamimi1, Itay Shalom1
1Edmond & Lily Safra Center for Brain Sciences, Hebrew University of Jerusalem, Jerusalem 9190401, Israel.
Abstract:
Fiber photometry is a widely used technique in neuroscience for monitoring neural activity in specific cell populations of freely behaving animals.1 Utilizing genetically encoded calcium indicators (GECIs) like GCaMP, this method detects changes in intracellular calcium levels, which reflect neuronal activity.1,2,3,4 Traditionally, it has been assumed that fiber photometry signals primarily represent action-potential-induced calcium influx in neuronal somas. However, recent studies have questioned this view, with the observation that a significant portion of the recorded calcium signal originates from the neuropil.5,6 Because neuropil calcium flux can be induced by other biological phenomena, namely subthreshold events that are uncorrelated with action-potential firing, this finding has consequences for the interpretation of the fiber photometry signal. Thus, whether fiber photometry is a reliable reporter of action-potential firing is still an open question. To investigate this, we conducted simultaneous recordings from indirect and direct pathway spiny projection neurons (SPNs) in the ventrolateral striatum (VLS) and their axonal projections to the globus pallidus externus (GPe) and substantia nigra reticulata (SNr) in freely behaving mice. Our findings revealed a robust correlation between calcium signals in the cell bodies and axons of SPNs, indicating that fiber photometry captures activity propagating along neuronal projections. Understanding the precise origins of these signals is crucial for the accurate interpretation of neuronal dynamics and for designing experiments that utilize fiber photometry to study brain function.
More Related Videos
Related Concept Videos
Relating Angular And Linear Quantities - II
Parallel-axis Theorem
Perpendicular-Axis Theorem
Consider a circular disc of mass M and radius R lying along an x-y plane. The origin lies at the center of the disc, and the z-axis is perpendicular to the disc's plane. All three axes coincide at the disc's center. The moment of inertia of this...
Curvilinear Motion: Rectangular Components
As the car advances, its position evolves over time. Quantifying the car's velocity involves computing the time...
Design Example: Measuring Distance Between Two Points with Obstructions
Arc Length of a Curve: Problem Solving

