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Copper acquisition in Bacillus subtilis involves Cu(II) exchange between YcnI and YcnJ
Yuri Rafael de Oliveira Silva1, Grayson Barnes2, Dia Zheng1
1Department of Chemistry, Lehigh University, Bethlehem, Pennsylvania, USA.
The Journal of Biological Chemistry
|July 16, 2025
Summary
Bacillus subtilis uses YcnJ and YcnI proteins to manage essential copper (Cu) uptake. These proteins bind and exchange Cu(II), crucial for bacterial growth under limited copper conditions.
Area of Science:
- Microbiology
- Biochemistry
- Molecular Biology
Background:
- Copper (Cu) is essential for life, but its transport and utilization in bacteria remain incompletely understood.
- The Gram-positive bacterium Bacillus subtilis possesses a ycnKJI operon encoding proteins involved in Cu homeostasis, including YcnI and YcnJ.
- Mechanisms of Cu recognition and intracellular trafficking to metalloproteins require further elucidation.
Purpose of the Study:
- To investigate the roles of YcnI and YcnJ in copper uptake and regulation in Bacillus subtilis.
- To characterize the interaction between YcnJ and YcnI in copper binding and transfer.
- To elucidate the functional significance of these interactions for bacterial growth under copper limitation.
Main Methods:
- Biochemical assays to determine Cu(II) binding stoichiometry and affinity of YcnJ extracellular domain (YcnJ^CopC).
- Investigation of Cu(II) exchange between YcnJ^CopC and YcnI.
- Genetic studies involving gene knockouts and site-directed mutagenesis to assess the impact on bacterial growth.
Main Results:
- The YcnJ^CopC domain binds Cu(II) with high affinity in a 1:1 ratio, utilizing a histidine brace motif.
- YcnJ^CopC and YcnI were shown to readily exchange Cu(II).
- Disruption of YcnI or YcnJ, or mutation of critical Cu-binding residues, resulted in impaired bacterial growth under copper-limited conditions.
Conclusions:
- Both YcnI and YcnJ contribute to efficient copper import in Bacillus subtilis, particularly under conditions of copper scarcity.
- A model is proposed where YcnI sequesters Cu(II) from YcnJ, regulating cytoplasmic entry and potentially storing copper extracellularly.
- This extracellular transfer mechanism between membrane-bound proteins suggests a novel paradigm for bacterial copper management.
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