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Isolation and Culture of Rodent Microglia to Promote a Dynamic Ramified Morphology in Serum-free Medium
Published on: March 9, 2018
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Rod-shaped microglia represent a morphologically distinct subpopulation of disease-associated microglia
Yukio Matsuba1,2, Kenichi Nagata3, Yosuke Kadota4
1Pionnering Research Division, Medical Innovation Research Center, Shiga University of Medical Science, Seta Tsukinowa-Cho, Otsu, Shiga, 520-2192, Japan.
Journal of Neuroinflammation
|July 16, 2025
Summary
Researchers identified a novel population of rod-shaped microglia in mice with oxidative stress. These cells, resembling disease-associated microglia (DAM), emerge early in neurodegeneration and may be regulated by urokinase-type plasminogen activator (uPA) signaling.
Area of Science:
- Neuroscience
- Immunology
- Cell Biology
Background:
- Microglia, the brain's immune cells, exhibit diverse states during pathology.
- Single-cell RNA sequencing reveals microglial heterogeneity, but links to morphology are unclear.
- Glutathione deficiency-induced oxidative stress models offer insights into neurodegeneration.
Purpose of the Study:
- To identify and characterize a distinct population of rod-shaped microglia in a model of oxidative stress.
- To investigate the molecular mechanisms and signaling pathways involved in the formation of rod-shaped microglia.
- To explore the potential role of rod-shaped microglia in early neurodegeneration.
Main Methods:
- Utilized glutamyl cysteine ligase (GCLC)-deficient mice to model glutathione deficiency and oxidative stress.
- Performed morphological and molecular analyses, including single-nucleus RNA sequencing.
- Investigated the role of C1q in rod-shaped microglia formation and analyzed gene expression profiles.
Main Results:
- Identified rod-shaped microglia with elongated morphology in GCLC-deficient mice during early neurodegeneration.
- Found that rod-shaped microglia formation is independent of C1q.
- Gene expression profiles of rod-shaped microglia resemble disease-associated microglia (DAM).
- Single-nucleus RNA sequencing suggested involvement of urokinase-type plasminogen activator (uPA) signaling and increased phosphorylated growth-associated protein 43 (GAP43).
Conclusions:
- Rod-shaped microglia represent a previously unrecognized activated population emerging early in neurodegeneration.
- Their formation appears to be regulated by a C1q-independent mechanism, potentially involving uPA signaling and GAP43.
- Understanding these early microglial responses may reveal novel therapeutic targets for neurodegenerative diseases.

