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Updated: Sep 14, 2025

Engineering Artificial Factors to Specifically Manipulate Alternative Splicing in Human Cells
Published on: April 26, 2017
An SRRM3-regulated neural alternative splicing program is subverted to promote tumor progression in pancreatic
Myrto Potiri1, Charikleia Moschou2, Zoi Erpapazoglou2
1Institute for Fundamental Biomedical Research, B.S.R.C. "Alexander Fleming", 16672 Athens, Greece; Department of Biochemistry & Biotechnology, University of Thessaly, 41500 Larissa, Greece.
Abstract:
Pancreatic neuroendocrine tumors (PanNETs) are a heterogeneous group of neoplasms arising in pancreatic islets and altering the hormone-secreting function of neuroendocrine cells. Genome-wide approaches have revealed the genomic landscape of PanNETs but have not explained their problematic hormone secretion. We show here that alternative splicing (AS) deregulation is responsible for changes in the secretory ability of PanNET cells. We reveal that the RNA-binding protein SRRM3 is upregulated in PanNETs and favors the inclusion of a group of alternative microexons in certain mRNAs. These microexons are part of a larger neural program regulated by SRRM3, and their inclusion results in protein isoforms that change stimulus-induced insulin trafficking and secretion. By downregulating SRRM3 or inhibiting its binding to three of the microexon-bearing pre-mRNAs in animal and cellular PanNET models, we prove the necessity of SRRM3 for hormone secretion, PanNET progression, and enhancement of the neural component of PanNET tumors.
Insights
Alternative splicing deregulation, driven by upregulated SRRM3, alters hormone secretion in pancreatic neuroendocrine tumors (PanNETs). Inhibiting SRRM3 impacts PanNET progression and neural characteristics.
Area of Science:
- Molecular Biology
- Oncology
- Genetics
Background:
- Pancreatic neuroendocrine tumors (PanNETs) are complex neoplasms affecting neuroendocrine cell hormone secretion.
- Previous genomic studies have not fully elucidated the mechanisms behind PanNETs' aberrant hormone secretion.
- Alternative splicing (AS) is a key regulator of gene expression with implications in cancer.
Purpose of the Study:
- To investigate the role of alternative splicing deregulation in PanNETs' secretory dysfunction.
- To identify specific RNA-binding proteins and their targets involved in PanNET hormone secretion.
- To explore therapeutic strategies targeting AS pathways in PanNETs.
Main Methods:
- Analysis of RNA-binding protein expression in PanNETs.
- Identification of SRRM3-regulated alternative microexons in PanNET cells.
- Functional studies in cellular and animal PanNET models involving SRRM3 downregulation and inhibition of its mRNA binding.
Main Results:
- SRRM3 is upregulated in PanNETs and promotes the inclusion of specific microexons in target mRNAs.
- Inclusion of these microexons generates protein isoforms that alter stimulus-induced insulin trafficking and secretion.
- Downregulation of SRRM3 or inhibition of its binding to microexon-containing pre-mRNAs reduces hormone secretion, inhibits PanNET progression, and diminishes the neural phenotype.
Conclusions:
- Alternative splicing deregulation, particularly SRRM3-mediated microexon inclusion, is a critical driver of secretory changes in PanNETs.
- SRRM3 plays a necessary role in PanNET hormone secretion, tumor progression, and the enhancement of their neural component.
- Targeting SRRM3 represents a potential therapeutic avenue for managing PanNETs.
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