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Updated: Sep 14, 2025

Evidence-based Knowledge Synthesis and Hypothesis Validation: Navigating Biomedical Knowledge Bases via Explainable AI and Agentic Systems
Published on: June 13, 2025
Lack of methodological rigor and limited coverage of generative artificial intelligence in existing artificial
Xufei Luo1, Bingyi Wang1, Qianling Shi2
1Evidence-Based Medicine Center, School of Basic Medical Sciences, Lanzhou University, Lanzhou, China; Research Unit of Evidence-Based Evaluation and Guidelines, Chinese Academy of Medical Sciences (2021RU017), School of Basic Medical Sciences, Lanzhou University, Lanzhou, China; World Health Organization Collaboration Center for Guideline Implementation and Knowledge Translation, Lanzhou, China; Institute of Health Data Science, Lanzhou University, Lanzhou, China; Key Laboratory of Evidence Based Medicine of Gansu Province, Lanzhou University, Lanzhou, China.
Objectives:
This study aimed to systematically map the development methods, scope, and limitations of existing artificial intelligence (AI) reporting guidelines in medicine and to explore their applicability to generative AI (GAI) tools, such as large language models (LLMs).
Study Design And Setting:
We reported a scoping review adhering to the Preferred Reporting Items for Systematic Reviews and Meta-Analyses extension for Scoping Reviews. Five information sources were searched, including MEDLINE (via PubMed), Enhancing the QUAlity and Transparency Of health Research (EQUATOR) Network, China National Knowledge Infrastructure, FAIRsharing, and Google Scholar, from inception to December 31, 2024. Two reviewers independently screened records and extracted data using a predefined Excel template. Data included guideline characteristics (eg, development methods, target audience, AI domain), adherence to EQUATOR Network recommendations, and consensus methodologies. Discrepancies were resolved by a third reviewer.
Results:
Sixty-eight AI reporting guidelines were included; 48.5% focused on general AI, whereas only 7.4% addressed GAI/LLMs. Methodological rigor was limited; 39.7% described development processes, 42.6% involved multidisciplinary experts, and 33.8% followed EQUATOR recommendations. Significant overlap existed, particularly in medical imaging (20.6% of guidelines). GAI-specific guidelines (14.7%) lacked comprehensive coverage and methodological transparency.
Conclusion:
Existing AI reporting guidelines in medicine have suboptimal methodological rigor, redundancy, and insufficient coverage of GAI applications. Future and updated guidelines should prioritize standardized development processes, multidisciplinary collaboration, and expanded focus on emerging AI technologies like LLMs.
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