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Updated: Sep 14, 2025

Synthesis of Wavelength-shifting DNA Hybridization Probes by Using Photostable Cyanine Dyes
Published on: July 6, 2016
Development of a natural product-based selective fluorescent sensor for Cu2+ and DNA/protein: insights from docking,
Sourav Pakrashy1, Manik Das1, Sounik Manna2
1Department of Chemistry, Prabhat Kumar College, Purba Medinipur 721404, WB, India. dolaimalay@yahoo.in.
Abstract:
The natural product seselin (SS), was synthesized and characterized spectroscopically for the selective detection of Cu2+ and biomolecules such as ct-DNA and BSA. The probe exhibits strong bluish emission in a MeOH-H2O (7 : 3, v/v) HEPES buffer solution (pH 7.4) at 453 nm. Upon exposure to Cu2+, the SS solution shows a selective fluorescence 'turn-off' with a binding constant of 2.13 × 105 M-1 and a detection limit of 3.48 × 10-8 M. The HOMO-LUMO energy gap of the probe SS decreases from ΔE = 7.97 eV to ΔE = 7.77 eV upon binding with Cu2+, indicating enhanced stability due to ligand-metal complex formation. Significantly, the ligand SS exhibits fluorescence enhancement in the presence of ct-DNA and BSA, resulting in a visible fluorescence change from colorless to blue, with binding constants of 4.8 × 104 M-1 and 4.7 × 104 M-1, respectively. The binding interactions of SS with biomacromolecules have been explored through molecular docking studies, revealing that the probe can serve as a promising anti-cancer and anti-viral agent. Furthermore, the probe SS demonstrates potent anticancer activity in treatments involving MCF-7 and HLC cells. Additionally, the probe SS is capable of detecting intracellular Cu2+ in live MCF-7 cell lines.

