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A Radiogenomic Deep Ensemble Learning Model for Identifying Radionecrosis Following Brain Metastases (BM)
Jingtong Zhao1, Eugene Vaios1, Evan Calabrese1
1Deparment of Radiation Oncology, Duke University, Durham, North Carolina.
Advances in Radiation Oncology
|July 21, 2025
Summary
A novel deep ensemble model accurately distinguishes brain metastases radionecrosis from recurrence after stereotactic radiosurgery (SRS) by integrating imaging, clinical, and genomic data. This AI approach improves diagnostic accuracy for post-SRS management.
Area of Science:
- Oncology
- Radiology
- Artificial Intelligence
Background:
- Stereotactic radiosurgery (SRS) is a common treatment for brain metastases (BM).
- Distinguishing post-SRS radionecrosis from tumor recurrence noninvasively remains a clinical challenge.
- Accurate differentiation is crucial for effective patient management and treatment planning.
Purpose of the Study:
- To develop a deep ensemble learning model for identifying radionecrosis versus recurrence in patients with BM after SRS.
- To integrate patient clinical features and genomic profiles with imaging data for improved diagnostic accuracy.
- To address the limitations of current noninvasive imaging methods in differentiating these conditions.
Main Methods:
- A deep neural network (DNN) was trained on 3-month post-SRS T1+c MRI scans from 90 BMs (62 patients) with non-small cell lung cancer.
- An ensemble model fused DNN-extracted deep features with clinical (D+C) or genomic (D+G) data using a novel positional encoding method.
- Model performance was evaluated against an image-only DNN and the individual D+C and D+G submodels.
Main Results:
- The deep ensemble model achieved a high diagnostic performance (ROC AUC = 0.91 ± 0.04).
- This significantly outperformed the image-only DNN (ROC AUC = 0.71 ± 0.05) and individual submodels (D+C: 0.82 ± 0.03, D+G: 0.83 ± 0.02).
- The model demonstrated strong sensitivity (0.87 ± 0.16), specificity (0.86 ± 0.08), and accuracy (0.87 ± 0.04).
Conclusions:
- The deep ensemble model shows superior performance in differentiating BM radionecrosis from recurrence.
- Integrating multi-modal data (imaging, clinical, genomic) enhances diagnostic capabilities.
- This AI-driven approach holds significant potential for improving clinical decision-making in BM management.

