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Updated: Sep 14, 2025

Isolating Free Carbenes, their Mixed Dimers and Organic Radicals
Published on: April 19, 2019
Computational Mechanistic Investigation of Biocatalytic C(sp3)-H Insertions with Monosubstituted Carbenes via
Jia-Min Chu1, Emily McGuire1, Yong Zhang1
1Department of Chemistry and Chemical Biology, Stevens Institute of Technology, 1 Castle Point Terrace, Hoboken, New Jersey 07030, United States.
Abstract:
A recent experimental study by Arnold's research group (Nature 2019, 565, 67-72) showed the engineered cytochrome P450 enzyme (cytochrome P411), with acceptor-only carbenes, offers a new sustainable alternative to metal catalysts that have traditionally dominated C-H functionalization. However, there is still no detailed mechanistic understanding thus far. In this study, a series of DFT calculations were performed to uncover the basic reaction mechanism as well as insights into the observed carbene substituent effect behind this novel reaction. Computational results showed that the reaction follows the radical hydrogen atom transfer (HAT) mechanism, which is consistent with experimental work. The electron-withdrawing carbene substituent together with the negatively charged axial ligand plays an important role in steering the reaction toward this mechanism. The more favorable experimental reactivity with the carbene derived from ethyl diazoacetate than diazoacetone was also reproduced. It was found to originate from the additional hydrogen bonds with the carboxylate substituent of the carbene, which further stabilizes the transition state toward a more facile HAT reaction. This quantum chemical study provides useful molecular-level insights that help shed light on the future design of the biocatalysts to contribute to the development of efficient, sustainable C-H functionalization approaches.
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