Complete genome sequence of Burkholderia cenocepacia bacteriophage Karil-mokiny-1

Jack S Canning1,2, Kak-Ming Ling1,3, Daniel R Laucirica1

  • 1Wal-Yan Respiratory Research Centre, Kids Research Institute Australia, The University of Western Australia, Perth, Western Australia, Australia.

Insights

A novel bacteriophage targeting Burkholderia cenocepacia, a bacterium causing severe respiratory infections, was discovered in wastewater. This virus, classified as Irusalimvirus, shows no genes linked to bacterial resistance or virulence.

Area of Science:

  • Microbiology
  • Virology
  • Infectious Diseases

Background:

  • The Burkholderia cepacia complex is a group of opportunistic pathogens notorious for causing severe respiratory tract infections, particularly in individuals with compromised immune systems or underlying lung conditions like cystic fibrosis.
  • The rise of antibiotic resistance in bacterial pathogens necessitates the exploration of alternative therapeutic strategies, such as phage therapy.

Purpose of the Study:

  • To isolate and characterize bacteriophages with lytic activity against specific strains of the Burkholderia cepacia complex.
  • To investigate the genomic features of a newly isolated bacteriophage for potential therapeutic applications.

Main Methods:

  • Isolation of bacteriophages from environmental samples, specifically wastewater.
  • Genomic sequencing and analysis of the isolated bacteriophage.
  • Bioinformatic analysis to identify genes related to lysogeny, bacterial resistance, and virulence.

Main Results:

  • A bacteriophage exhibiting lytic activity against Burkholderia cenocepacia was successfully isolated from wastewater.
  • The bacteriophage possesses a genome size of 70,144 bp and has been taxonomically classified within the Irusalimvirus genus.
  • Genomic analysis revealed the absence of genes associated with lysogeny, bacterial resistance mechanisms, or virulence factors.

Conclusions:

  • The isolated Irusalimvirus bacteriophage represents a promising candidate for phage therapy against Burkholderia cenocepacia infections.
  • Its lack of lysogenic, resistance, or virulence genes suggests a potentially safe and effective lytic agent for combating these challenging infections.

Related Concept Videos

DNA Bacteriophages01:26

DNA Bacteriophages

Bacteriophages, or phages, are viruses that specifically infect bacteria, utilizing their genetic material to hijack host cellular machinery for replication. DNA bacteriophages employ single-stranded DNA (ssDNA) or double-stranded DNA (dsDNA) genomes. These phages exhibit diverse replication strategies and host interactions, influencing their ecological roles and applications in biotechnology and medicine.ssDNA BacteriophagesssDNA phages, with their small genomes, utilize unique strategies to...
154
Lytic Cycle of Bacteriophages01:30

Lytic Cycle of Bacteriophages

Bacteriophages, also known as phages, are specialized viruses that infect bacteria. A key characteristic of phages is their distinctive “head-tail” morphology. A phage begins the infection process (i.e., lytic cycle) by attaching to the outside of a bacterial cell. Attachment is accomplished via proteins in the phage tail that bind to specific receptor proteins on the outer surface of the bacterium. The tail injects the phage’s DNA genome into the bacterial cytoplasm. In the...
72.1K
Viral Replication: Lytic Cycle01:20

Viral Replication: Lytic Cycle

Bacteriophages, or phages, are viruses that specifically infect bacteria. Among them, T-even bacteriophages, such as T4, exhibit a well-characterized lytic replication cycle in Escherichia coli (E. coli). This process ensures the rapid proliferation of the virus while ultimately leading to the destruction of the bacterial host.Attachment and DNA InjectionThe infection process begins with the recognition and binding of the T4 phage to the E. coli cell surface. Tail fibers of the phage...
272
Lysogenic Cycle of Bacteriophages00:43

Lysogenic Cycle of Bacteriophages

In contrast to the lytic cycle, phages infecting bacteria via the lysogenic cycle do not immediately kill their host cell. Instead, they combine their genome with the host genome, allowing the bacteria to replicate the phage DNA along with the bacterial genome. The incorporated copy of the phage genome is called the prophage. Some prophages can re-activate and enter the lytic cycle. This often occurs in response to a perturbation, such as DNA damage, but can also transpire in the absence of...
63.3K
Viral Replication: Lysogenic Cycle01:16

Viral Replication: Lysogenic Cycle

The lysogenic cycle is a crucial viral replication strategy that allows bacteriophages to persist within host cells without immediately destroying them. This process is primarily observed in temperate phages, such as bacteriophage lambda (λ), which infects Escherichia coli. The cycle allows the viral genome to persist across bacterial generations while keeping host cells viable.Integration of the Viral GenomeUpon infection, bacteriophage lambda attaches to the bacterial surface and injects...
251