Bioinformatic analysis and retrospective clinical study identifying DNAJB4 as a pan-cancer biomarker with a highlight

Chuanmin Chu1,2, Bingnan Lu3, Wenjia Fu3

  • 1Department of Urology, Zhongda Hospital Affiliated to Southeast University, Nanjing, 210000, China.

Insights

DNAJB4 is a tumor suppressor with lower expression in many cancers. Reduced DNAJB4 correlates with poor prognosis and advanced stages, offering potential therapeutic targets in kidney neoplasms and other cancers.

Area of Science:

  • Oncology
  • Molecular Biology
  • Genomics

Background:

  • DNAJB4 is implicated in tumor suppression and proteostasis.
  • A comprehensive pan-cancer analysis of DNAJB4's role is needed.

Purpose of the Study:

  • To conduct a pan-cancer analysis of DNAJB4 expression and clinical significance.
  • To investigate DNAJB4's association with genomic alterations, immune microenvironment, and drug sensitivity.
  • To evaluate DNAJB4's prognostic value in kidney neoplasms.

Main Methods:

  • Pan-cancer analysis of DNAJB4 expression, competing endogenous RNA, protein-protein interactions, tumor purity, genomic profiling, and immune microenvironment.
  • Gene set enrichment analysis to identify associated pathways.
  • Immunohistochemistry in 370 kidney neoplasm patients to assess clinical significance.

Main Results:

  • DNAJB4 expression was significantly lower in tumor tissues across multiple cancers and in kidney neoplasms.
  • Reduced DNAJB4 expression correlated with poorer clinical outcomes, advanced tumor stages, and specific genomic/immune profiles.
  • Lower DNAJB4 levels were linked to unfavorable progression-free and overall survival in kidney neoplasms.

Conclusions:

  • DNAJB4 is a significant tumor suppressor and prognostic biomarker in pan-cancer, especially in kidney neoplasms.
  • DNAJB4 expression is associated with tumorigenesis, cancer staging, and patient prognosis.
  • Targeting DNAJB4 presents a potential therapeutic strategy for various cancers.

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