Machine Learning-Driven Identification of Blood-Based Biomarkers and Therapeutic Agents for Personalized Ischemic
Jing Liu1, Congxia Bai2, Haitao Yang1
1State Key Laboratory of Cardiovascular Disease, Fuwai Hospital, National Center for Cardiovascular Diseases, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, 100037, China.
Abstract:
Ischemic stroke (IS) is the most common subtype of stroke. However, reliable blood biomarkers for early diagnosis remain unavailable. This study developed a predictive model based on peripheral blood (PB) biomarkers. PB samples from two independent cohorts including IS patients and healthy controls (CTR) were analyzed by RNA sequencing (RNA-seq). 69 mRNAs were consistently and significantly dysregulated in IS patients. Functional enrichment analysis revealed that the IS phenotype was negatively associated with NK cell-mediated cytotoxicity and single-sample gene set enrichment analysis (ssGSEA) revealed a significant reduction in Cd56bright NK cells, Cd56dim NK cells, and NKT cells in IS patients. A four-gene diagnostic model-BCL2A1, FAM200B, IGJ, and TXN-was identified and exhibited high diagnostic accuracy across derivation, validation, and external cohorts (AUCs: 0.94, 0.91, and 0.96, respectively). Additionally, potential small molecule compounds were screened using Enrichr database, among which cytochalasin D may represent a novel candidate drug for IS treatment.


