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Placental Gene Expression Associated With Early Childhood Growth Trajectories and Obesity Risk
Hyo Young Choi1, Luhang Han1, Alison G Paquette2
1Department of Preventive Medicine, College of Medicine, University of Tennessee Health Science Center, Memphis, Tennessee, USA.
Insights
Placental gene expression is linked to childhood growth patterns and obesity risk. Immune system genes in the placenta may play a key role in developing childhood obesity.
Area of Science:
- Genetics and Developmental Biology
- Pediatric Health
- Epigenetics
Background:
- Early childhood growth trajectories and obesity are influenced by complex genetic and environmental factors.
- Placental gene expression is a critical determinant of fetal development and may impact long-term health outcomes.
- Understanding the molecular basis of early growth is essential for developing effective obesity prevention strategies.
Purpose of the Study:
- To investigate the association between placental gene expression and early childhood growth trajectories.
- To identify specific genes and biological pathways in the placenta related to childhood obesity risk.
- To explore potential causal relationships between placental gene expression and growth outcomes using Mendelian randomization.
Main Methods:
- Analysis of placental transcriptome data from 794 children in the Conditions Affecting Neurocognitive Development and Learning in Early Childhood study.
- Identification of differentially expressed genes (DEGs) associated with body mass index (BMI) trajectories and overweight/obesity at age 4 years.
- Pathway enrichment analysis and Mendelian randomization (MR) to explore biological pathways and causal links.
Main Results:
- 22 and 23 DEGs were associated with BMI trajectories and overweight/obesity, respectively (false discovery rate [FDR] < 0.05).
- Pathway analysis revealed 26 biological pathways, predominantly linked to the immune system.
- MR analysis suggested potential causal associations for one DEG with BMI trajectories and eight DEGs with overweight/obesity (FDR < 0.05).
Conclusions:
- Placental gene expression is associated with early childhood growth trajectories and obesity risk.
- Genes within the placental immune system may be significant contributors to the development of childhood obesity.
- These findings highlight the placenta as a potential target for interventions aimed at preventing childhood obesity.
Objective:
This study aimed to investigate the association of placental gene expression with early childhood growth trajectories and obesity risk.
Methods:
We analyzed 794 children from the Conditions Affecting Neurocognitive Development and Learning in Early Childhood study. Placental samples collected at delivery underwent RNA sequencing to obtain transcriptome data. BMI trajectories from birth to 4 years (rising-high-, moderate-, and low-BMI) and overweight/obesity at 4 years were the childhood outcomes of interest. Differentially expressed genes (DEGs) associated with the outcomes were identified using DESeq2. Pathway enrichment analysis was performed on DEGs. Their causal relationships with outcomes were explored using the Mendelian randomization (MR) approach.
Results:
We identified 22 and 23 DEGs associated with BMI trajectories and overweight/obesity, respectively, with false discovery rates (FDR) < 0.05. Pathway analysis of these DEGs identified 26 biological pathways, primarily related to the immune system. MR analysis suggested that one (SSX2B) and eight DEGs (e.g., HSPA1A, DNAJB1) might be causally associated with the BMI trajectories and overweight/obesity (FDR < 0.05), respectively.
Conclusions:
This study identified placental gene expression associated with early childhood growth outcomes. These findings suggest the potential important role of placental immune system genes in the development of childhood obesity.
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