Interpretable machine learning approaches for predicting prostate cancer by using multiple heavy metal exposures
Zu-Ming You1, Yuan-Sheng Li1, Fan-Shuo Meng1
1Department of Biostatistics, School of Public Health (State Key Laboratory of Multi-organ Injury Prevention and Treatment, and Guangdong Provincial Key Laboratory of Tropical Disease Research), Southern Medical University, Guangzhou 510515, China.
Machine learning identified key heavy metals linked to prostate cancer (PCA) risk. Blood lead, urinary cesium, and antimony showed increased PCA risk, while blood cadmium showed decreased risk.
Area of Science:
- Environmental Health
- Oncology
- Computational Biology
Background:
- Environmental pollution is a significant factor in prostate cancer (PCA) development.
- Limited research exists on the association between multiple heavy metal exposures and PCA risk using machine learning.
Purpose of the Study:
- To develop and evaluate machine learning models for predicting prostate cancer risk based on heavy metal exposure.
- To identify specific heavy metals associated with prostate cancer risk.
Main Methods:
- Utilized data from 8022 samples (2003-2018 NHANES database) including 18 blood and urinary heavy metals/minerals and 14 covariates.
- Evaluated eight machine learning models, with Random Forest (RF) showing superior performance.
- Integrated four interpretable methods to identify key risk factors.
Main Results:
- The RF model achieved 72.8% accuracy and an AUC of 0.869.
- Positive associations with PCA risk were found for blood lead (Pb), urinary cesium (Cs), and urinary antimony (Sb).
- Blood cadmium (Cd) showed a negative association; urinary Cs and Sb were identified as novel risk factors.
Conclusions:
- Machine learning models, particularly RF, can effectively predict PCA risk based on heavy metal exposure.
- Blood Pb, urinary Sb, and urinary Cs are significant contributors to PCA risk, offering potential targets for prevention and control strategies.
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