Efficient Tonsillar T Follicular Helper Cell Processing and Functional Analysis through High-dimensional Flow
Qin Xu1, Lihong Shi1, Brian L P Dizon2
1Cell Signaling and Immunity Section, Laboratory of Immune System Biology, National Institute of Allergy and Infectious Diseases, National Institutes of Health.
Journal of Visualized Experiments : Jove
|July 28, 2025
Summary
This study details a protocol for human tonsil cell isolation and culture, crucial for studying T follicular helper (Tfh) cells. It also presents flow cytometry methods and data analysis techniques for Tfh cell research.
Area of Science:
- Immunology
- Cell Biology
Background:
- T follicular helper (Tfh) cells are critical for adaptive humoral immunity, influencing B cell responses in infection, autoimmunity, and vaccination.
- Understanding Tfh cell development and function is key for vaccine design and targeted therapies for immune-related diseases.
Purpose of the Study:
- To provide a comprehensive protocol for the collection, isolation, preservation, and culture of human tonsil cells.
- To introduce optimized spectral flow cytometry panels for detailed Tfh cell characterization.
- To demonstrate the utility of high-dimensional data analysis for uncovering treatment-induced immune cell differences.
Main Methods:
- Human tonsil tissue collection, cell isolation, and in vitro culture.
- Development and optimization of two spectral flow cytometry panels for Tfh cell phenotyping.
- Application of unsupervised analysis on high-dimensional flow cytometry data.
Main Results:
- A standardized protocol for human tonsil cell processing was established.
- Optimized flow cytometry panels enable in-depth characterization of Tfh cells and related immune populations.
- Unsupervised analysis successfully identified subtle, treatment-induced changes in high-dimensional immune cell data.
Conclusions:
- Human tonsil cells provide a valuable model for studying Tfh cell biology and immune responses.
- The presented protocol and flow cytometry panels facilitate robust Tfh cell research.
- High-dimensional data analysis is a powerful tool for discovering immune cell alterations in response to stimuli or treatments.


