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Updated: Sep 13, 2025

The Importance of Correct Protein Concentration for Kinetics and Affinity Determination in Structure-function Analysis
Published on: March 17, 2010
Bis-urea anion receptors: influence of receptor structure and anion nature on binding affinity and stability
Elsayed Hassan1, Mickey Vinodh1, Fatemeh H Alipour1
1Chemistry Department, Kuwait University P.O. Box 5969 Safat 13060 Kuwait t.alazemi@ku.edu.kw +965-2481-6482 +965-2498-5631.
Abstract:
Complexation behavior of bis-urea receptors bearing nitro substituent at different proximities from urea binding site was investigated using isothermal titration calorimetry (ITC) and 1H NMR (Nuclear Magnetic Resonance) titration experiments. Their binding interactions with fluoride (F-), acetate (OAc-), and dihydrogen phosphate (H2PO4 -) anions were examined to evaluate affinities, stoichiometries, and thermodynamic parameters. The nature of the anion and the position of the nitro substituent significantly influenced receptor binding ability. Receptors with ortho-nitro groups underwent decomposition upon interaction with F-, forming 2-benzimidazolinone cyclic urea as evidence from relatively large positive enthalpy (ΔH° = 13.78 kJ mol-1) and entropy (ΔTS° = 30.90 kJ mol-1). Furthermore, X-ray diffraction analysis revealed that the cyclic urea engages in complexation with the fluoride anion. This degradation was suppressed in meta-substituted analog. Notably, meta-nitro receptor exhibited high binding affinity toward acetate (ΔH° = -27.73 kJ mol-1), while H2PO4 - binding for all receptors showed large entropic contributions, due to the geometry and size of the anion. These results offer insights into designing selective and stable anion receptors.
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