Related Experiment Video
Updated: Sep 13, 2025

Integration of Bioinformatics Approaches and Experimental Validations to Understand the Role of Notch Signaling in Ovarian Cancer
Published on: January 12, 2020
Hepatoma-derived growth factor and non-coding RNA network in ovarian cancer patients
Reza Ganjali1, Setare Nassiri2, Narges Zamani3
1Department of Biochemistry, School of Medicine, Iran University of Medical Sciences, Tehran, Iran.
Background:
Ovarian cancer (OC) remains the most lethal gynecologic malignancy due to late diagnosis and limited effective biomarkers. Hepatoma-derived growth factor (HDGF) has emerged as an oncogene implicated in tumor progression, yet its regulation and clinical potential in OC remains underexplored. Recent evidence suggests that long non-coding RNAs (lncRNAs) and microRNAs (miRNAs) may modulate oncogenic pathways through competing endogenous RNA (ceRNA) networks.
Methods And Results:
Fifty ovarian cancer and fifty normal ovarian tissue samples were analyzed for HDGF, miR-345-5p, and LINC00839 expression using qRT-PCR. Bioinformatic tools were employed to predict RNA-RNA interactions and reconstruct a ceRNA network. Statistical analyses examined expression correlations and diagnostic performance via ROC curve. HDGF and LINC00839 were significantly upregulated, while miR-345-5p was downregulated in OC tissues (p < 0.001). HDGF expression correlated positively with LINC00839 (r = 0.70) and inversely with miR-345-5p (r = -0.58), suggesting a regulatory axis where LINC00839 sponges miR-345-5p to derepress HDGF. Elevated HDGF levels were associated with larger tumor size, advanced FIGO stage, and metastasis. ROC analysis revealed that HDGF serum level (AUC = 0.88) has promising diagnostic potential, albeit lower than CA-125 and HE4.
Conclusion:
Our study highlights the LINC00839-miR-345-5p-HDGF axis as a key regulatory network in ovarian cancer. HDGF may serve as a clinically relevant biomarker for disease progression, while LINC00839 and miR-345-5p represent promising therapeutic targets. These findings provide a foundation for future investigations into ceRNA-based diagnostics and treatments in OC.
Insights
Ovarian cancer (OC) progression is linked to the LINC00839-miR-345-5p-HDGF axis. This study identifies Hepatoma-derived growth factor (HDGF) as a potential biomarker for OC and suggests targeting lncRNAs and miRNAs for new therapies.
Area of Science:
- Oncology
- Molecular Biology
- Biochemistry
Background:
- Ovarian cancer (OC) is a lethal gynecologic malignancy with limited diagnostic biomarkers.
- Hepatoma-derived growth factor (HDGF) is an oncogene implicated in tumor progression, but its role in OC is underexplored.
- Long non-coding RNAs (lncRNAs) and microRNAs (miRNAs) may regulate oncogenic pathways via competing endogenous RNA (ceRNA) networks.
Purpose of the Study:
- To investigate the regulatory role of the lncRNA LINC00839, miR-345-5p, and HDGF in ovarian cancer.
- To explore the potential of the LINC00839-miR-345-5p-HDGF axis in OC pathogenesis.
- To evaluate HDGF as a potential diagnostic biomarker for ovarian cancer.
Main Methods:
- Quantitative real-time PCR (qRT-PCR) was used to analyze HDGF, LINC00839, and miR-345-5p expression in 50 OC and 50 normal ovarian tissues.
- Bioinformatic tools were utilized to predict RNA-RNA interactions and construct a ceRNA network.
- Statistical analyses, including correlation analysis and receiver operating characteristic (ROC) curve analysis, were performed.
Main Results:
- HDGF and LINC00839 were significantly upregulated, while miR-345-5p was downregulated in OC tissues (p < 0.001).
- HDGF expression positively correlated with LINC00839 and inversely with miR-345-5p, indicating a ceRNA regulatory axis.
- Elevated HDGF levels were associated with advanced tumor stage, larger tumor size, and metastasis. HDGF serum levels showed promising diagnostic potential (AUC = 0.88).
Conclusions:
- The LINC00839-miR-345-5p-HDGF axis is a key regulatory network in ovarian cancer.
- HDGF may serve as a clinically relevant biomarker for OC progression.
- LINC00839 and miR-345-5p represent potential therapeutic targets for ceRNA-based interventions in OC.
Related Concept Videos
mTOR Signaling and Cancer Progression
The mTOR pathway or the...
lncRNA - Long Non-coding RNAs
Mitogens and the Cell Cycle

