Structure-guided expansion strategy unveils potent allosteric SHP2 inhibitors with synergistic efficacy against AML

Maoqian Zhang1, Shuyun Wu1, Menghui Liu1

  • 1School of Pharmacy, Nanjing University of Chinese Medicine, Nanjing, 210023, China.

Insights

Next-generation allosteric inhibitors targeting SHP2 (Src homology 2 domain-containing protein tyrosine phosphatase 2) show enhanced potency. Compound B8 synergizes with MCL-1 inhibitors in acute myeloid leukemia models, revealing a novel therapeutic strategy.

Area of Science:

  • Oncology
  • Pharmacology
  • Structural Biology

Background:

  • SHP2 phosphatase is a key driver in cancers via RAS-MAPK, PI3K-AKT, and JAK-STAT pathways.
  • Allosteric SHP2 inhibitors offer advantages over orthosteric agents by stabilizing the autoinhibited conformation.
  • Further optimization is needed to improve the potency, selectivity, and clinical efficacy of SHP2 inhibitors.

Purpose of the Study:

  • To design and synthesize novel, next-generation allosteric SHP2 inhibitors.
  • To evaluate the enzymatic activity, pharmacokinetic properties, and oral bioavailability of new compounds.
  • To investigate the therapeutic potential of dual SHP2 and MCL-1 targeting in acute myeloid leukemia.

Main Methods:

  • Structure-guided drug design utilizing detailed profiling of the SHP2 allosteric pocket.
  • Systematic optimization of a pyrrolo[2,1-f][1,2,4]triazin-4(3H)-one scaffold.
  • In vitro enzymatic assays, pharmacokinetic studies, and in vivo efficacy studies in acute myeloid leukemia models.

Main Results:

  • Compounds B1 and B8 achieved nanomolar enzymatic inhibition (IC50 = 39 nM and 15 nM, respectively).
  • Compounds B1 and B8 demonstrated acceptable pharmacokinetics and potential for oral bioavailability.
  • Compound B8 exhibited significant synergy with the MCL-1 inhibitor VU661013 in preclinical AML models.

Conclusions:

  • Rational design strategies can yield potent and orally bioavailable allosteric SHP2 inhibitors.
  • Dual targeting of SHP2 and MCL-1 presents a promising therapeutic approach for acute myeloid leukemia.
  • This study provides a foundation for developing combinatorial regimens to improve outcomes in high-risk cancers.