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Chromatin Immunoprecipitation Assay for the Identification of Arabidopsis Protein-DNA Interactions In Vivo
Published on: January 14, 2016
Temperature-responsive N4-acetylcytidine mRNA modification controls thermosensory flowering in Arabidopsis
Xiaowei Wu1, Songyao Zhang2, Tingting Su1
1Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore 117543, Singapore; Temasek Life Sciences Laboratory, National University of Singapore, 1 Research Link, Singapore 117604, Singapore.
Abstract:
N4-acetylcytidine (ac4C) represents the only acetylation modification on eukaryotic mRNAs. Although ac4C mRNA modification has been recently identified in plants, its biological function in plant response to environmental signals and related underlying mechanisms remain elusive. Here, we show that two ac4C writers, N-acetyltransferase 10A (NAT10A) and NAT10B, determine thermosensory flowering in Arabidopsis by mediating ac4C deposition on the transcripts of FLOWERING LOCUS M (FLM) and their temperature-dependent alternative splicing. NAT10A and NAT10B are rapidly induced by low ambient temperature, resulting in a transcriptome-wide increase in ac4C modification on target transcripts, including FLM. Consequently, elevated ac4C on nascent FLM transcripts impedes the binding of SPLICING FACTOR 1 to FLM to favor the production of the splice variants FLM-δ versus FLM-β, thereby preventing extremely late flowering at low ambient temperature. These findings demonstrate that ac4C RNA modification constitutes an integral part of the flowering regulatory network that effectively responds to changing temperatures.
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