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Updated: Sep 13, 2025

Selecting Multiple Biomarker Subsets with Similarly Effective Binary Classification Performances
Published on: October 11, 2018
Comparing variable and feature selection strategies for prediction - protocol of a simulation study in
Linard Hoessly1, Jaromil Frossard1, Simon Schwab2
1Data Center of the Swiss Transplant Cohort Study, University Hospital Basel, Basel, Switzerland.
Abstract:
The integration of machine learning methodologies has become prevalent in the development of clinical prediction models, often suggesting superior performance compared to traditional statistical techniques. Within the scope of low-dimensional datasets, encompassing both classical and machine learning paradigms, we plan to undertake a comparison of variable selection methodologies through simulation-based analysis. The principal aim is the comparison of the variable selection strategies with respect to relative predictive accuracy and its variability, with a secondary aim the comparison of descriptive accuracy. We use six distinct statistical learning approaches across both data generation and model learning. The present manuscript is a protocol for the corresponding simulation study registration (Study registration Open Science Framework ID: k6c8f). We describe the planned steps through the Aims, Data, Estimands, Methods, and Performance framework for simulation study design and reporting.
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