Related Experiment Video
Updated: Sep 12, 2025

14:22
Free Radicals in Chemical Biology: from Chemical Behavior to Biomarker Development
Published on: April 15, 2013
20.4K
Surf-DNA-Enabled DNA-Encoded Library-Compatible Amino Radical Transfer C(sp2)-C(sp3) Coupling
Dominic S Finis1, Nicholas Simmons1, Zhicai Shi2
1Discovery Chemistry, Johnson & Johnson, San Diego, California 92121, United States.
Organic Letters
|August 5, 2025
Summary
DNA-encoded libraries (DELs) now leverage surfactant-DNA (Surf-DNA) complexes for anhydrous chemical reactions. This innovation enables efficient C(sp2)-C(sp3) bond formation, advancing drug discovery screening.
Area of Science:
- Chemical Biology
- Organic Chemistry
- Drug Discovery
Background:
- DNA-encoded libraries (DELs) are crucial for hit identification, enabling screening of billions of compounds.
- Current DEL diversification methods often require partially aqueous conditions, limiting reaction scope.
- Surfactant-DNA (Surf-DNA) complexes were previously introduced to enable anhydrous DEL reactions.
Purpose of the Study:
- To expand the utility of Surf-DNA complexes for novel chemical transformations.
- To demonstrate the application of Surf-DNA in amino radical transfer (ART) coupling for C(sp2)-C(sp3) bond formation.
- To optimize and simplify the Surf-DNA workflow for large-scale DEL production.
Main Methods:
- Utilized surfactant-DNA (Surf-DNA) complexes to facilitate reactions under anhydrous conditions.
- Applied amino radical transfer (ART) coupling to forge C(sp2)-C(sp3) bonds on DNA-bound molecules.
- Developed an optimized and simplified Surf-DNA workflow.
Main Results:
- Successfully expanded Surf-DNA applications to include ART coupling for challenging C(sp2)-C(sp3) bond formation.
- Demonstrated high functional group tolerance and broad substrate scope for the ART coupling reaction.
- Reported an optimized and simplified Surf-DNA workflow suitable for large-scale DEL synthesis.
Conclusions:
- Surf-DNA complexes effectively facilitate anhydrous chemical reactions, including ART coupling, for DEL diversification.
- The expanded methodology allows for the construction of complex molecules with C(sp2)-C(sp3) linkages within DELs.
- The optimized workflow streamlines DEL production, enhancing its utility in hit-finding campaigns.
Related Concept Videos
Radical Reactivity: Overview
2.2K
Radicals, the highly reactive species, gain stability by undergoing three different reactions. The first reaction involves a radical-radical coupling, in which a radical combines with another radical, forming a spin‐paired molecule. The second reaction is between a radical and a spin‐paired molecule, generating a new radical and a new spin‐paired molecule. The third reaction is radical decomposition in a unimolecular reaction, forming a new radical and a spin‐paired...
2.2K
Maxam-Gilbert Sequencing
11.5K
In the same year as the discovery of the Sanger sequencing method, another group of scientists, Allan Maxam and Walter Gilbert, demonstrated their chemical-cleavage method for DNA sequencing. The Maxam-Gilbert method relies on using different chemicals that can cleave the DNA sequence at specific sites, the separation of resulting DNA fragments of variable size using electrophoresis, and deciphering the DNA sequence from the resulting gel bands.
Challenges of the Maxam-Gilbert Method
The...
Challenges of the Maxam-Gilbert Method
The...
11.5K
Radical Formation: Overview
2.2K
A bond can be broken either by heterolytic bond cleavage to form ions or homolytic bond cleavage to yield radicals. A fishhook arrow is used to represent the motion of a single electron in homolytic bond cleavage. There are two main sources from which radicals can be formed:
Radicals from spin-paired molecules:
Radicals can be obtained from spin-paired molecules either by homolysis or electron transfer. While two radicals are formed in the former, an electron is added in the...
Radicals from spin-paired molecules:
Radicals can be obtained from spin-paired molecules either by homolysis or electron transfer. While two radicals are formed in the former, an electron is added in the...
2.2K
Free-Radical Chain Reaction and Polymerization of Alkenes
8.2K
The conversion of alkenes to macromolecules called polymers is a reaction of high commercial importance. The structure of the polymer is defined by a repeating unit, while the terminal groups are considered insignificant. The average degree of polymerization represents the number of repeating units in the polymer molecule and is denoted by the subscript n.
8.2K
Radical Substitution: Allylic Bromination
5.3K
In organic synthesis, the formation of products can be altered by changing the reaction conditions. For example, a dibromo addition product is formed when propene is treated with bromine at room temperature. In contrast, propene undergoes allylic substitution in non-polar solvents at high temperatures to give 3-bromopropene. In order to avoid the addition reaction, the bromine concentration must be kept as low as possible throughout the reaction. This can be achieved using N-bromosuccinimide...
5.3K

