Construction and validation of immune prognosis model for lung adenocarcinoma based on machine learning
- Jinyu Zheng 1, Xiaoyi Xu 1, Xianguo Chen 1, Xianshuai Li 1, Miao Fu 2, Yiping Zheng 1, Jie Yang 2
- Jinyu Zheng 1, Xiaoyi Xu 1, Xianguo Chen 1
- 1Department of Cardiothoracic Surgery, Affiliated Jinhua Hospital, Zhejiang University School of Medicine, Jinhua, China.
- 2Department of Clinical Laboratory, Affiliated Jinhua Hospital, Zhejiang University School of Medicine, Jinhua, China.
- 0Department of Cardiothoracic Surgery, Affiliated Jinhua Hospital, Zhejiang University School of Medicine, Jinhua, China.
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View abstract on PubMed
Summary
This summary is machine-generated.This study developed a new prognostic model for lung adenocarcinoma (LUAD) using immune-related genes. The model identifies key biomarkers to improve personalized diagnosis and treatment strategies for LUAD patients.
Area Of Science
- Oncology
- Genomics
- Immunology
Background
- Lung adenocarcinoma (LUAD) is a major cause of cancer mortality with frequent recurrence and metastasis.
- Identifying reliable prognostic biomarkers is crucial for enhancing patient outcomes in LUAD.
Purpose Of The Study
- To construct and validate a robust immune-related prognostic model for LUAD.
- To identify key hub genes associated with immune infiltration and patient survival.
- To explore immune subtypes within LUAD for personalized treatment strategies.
Main Methods
- Transcriptomic data from TCGA and an external cohort were analyzed.
- Weighted Gene Co-expression Network Analysis (WGCNA) integrated differentially expressed and immune-related genes.
- Machine learning algorithms (Random Forest, LASSO, SVM-RFE) identified hub genes.
- Multivariate Cox regression, ROC, and ANN models assessed prognostic performance.
- Immune infiltration and subtype analyses were performed using TIMER, ssGSEA, and consensus clustering.
Main Results
- A prognostic model was built using four hub genes: CBLC, GDF10, LTBP4, and FABP4.
- The model demonstrated strong predictive accuracy in internal and external validation.
- Elevated levels of CD4+ T cells, macrophages, and dendritic cells were observed in LUAD.
- Two distinct immune subtypes with differing prognoses and immune landscapes were identified.
Conclusions
- A validated, immune-related prognostic model for LUAD was established.
- Key biomarkers correlating with immune infiltration and survival were identified.
- The findings provide a foundation for personalized diagnostic and therapeutic approaches in LUAD.
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