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Reducing bias in coronary heart disease prediction using Smote-ENN and PCA
1Universiti Malaya, Institute for Advanced Studies, Universiti Malaya, Kuala Lumpur, Wilayah Persekutuan Kuala Lumpur, Malaysia.
Insights
Machine learning improves coronary heart disease (CHD) diagnosis. Combining data balancing and feature reduction enhances the Random Forest model, boosting accuracy and F1-score for better CHD prediction and intervention.
Area of Science:
- Cardiology
- Artificial Intelligence
- Data Science
Background:
- Coronary heart disease (CHD) is a growing global health concern, particularly affecting younger individuals.
- Traditional CHD diagnosis and treatment face challenges including high costs, lengthy recovery, and limited efficacy.
- Complex diagnostic indicators and a shortage of medical professionals hinder accurate and timely CHD diagnosis.
Purpose of the Study:
- To develop an efficient machine learning framework for CHD diagnosis and prediction.
- To analyze CHD-related pathogenic factors using advanced computational techniques.
- To overcome data imbalance issues in CHD datasets for improved model performance.
Main Methods:
- Employed machine learning algorithms: Decision Trees, KNN, SVM, XGBoost, and Random Forest.
- Utilized SMOTE-ENN for addressing data imbalance and Principal Component Analysis (PCA) for feature reduction.
- Optimized models using Grid Search and evaluated performance with accuracy, precision, recall, F1-score, and AUC.
Main Results:
- The Random Forest model achieved 97.91% accuracy and 97.88% F1-score after SMOTE-ENN balancing and PCA.
- Data balancing and feature reduction significantly improved model performance compared to initial unbalanced data (85.26% accuracy, 12.58% F1-score).
- The combined approach demonstrated superior diagnostic and predictive capabilities for CHD.
Conclusions:
- The integrated machine learning framework offers an efficient tool for CHD diagnosis, mitigating challenges from limited medical resources.
- The study provides a scientific basis for precise CHD prevention and intervention strategies.
- The optimized Random Forest model represents a significant advancement in computational cardiology.
Abstract:
Coronary heart disease (CHD) is a major cardiovascular disorder that poses significant threats to global health and is increasingly affecting younger populations. Its treatment and prevention face challenges such as high costs, prolonged recovery periods, and limited efficacy of traditional methods. Additionally, the complexity of diagnostic indicators and the global shortage of medical professionals further complicate accurate diagnosis. This study employs machine learning techniques to analyze CHD-related pathogenic factors and proposes an efficient diagnostic and predictive framework. To address the data imbalance issue, SMOTE-ENN is utilized, and five machine learning algorithms-Decision Trees, KNN, SVM, XGBoost, and Random Forest-are applied for classification tasks. Principal Component Analysis (PCA) and Grid Search are used to optimize the models, with evaluation metrics including accuracy, precision, recall, F1-score, and AUC. According to the random forest model's optimization experiment, the initial unbalanced data's accuracy was 85.26%, and the F1-score was 12.58%. The accuracy increased to 92.16% and the F1-score reached 93.85% after using SMOTE-ENN for data balancing, which is an increase of 6.90% and 81.27%, respectively; the model accuracy increased to 97.91% and the F1-score increased to 97.88% after adding PCA feature dimensionality reduction processing, which is an increase of 5.75% and 4.03%, respectively, compared with the SMOTE-ENN stage. This indicates that combining data balancing and feature dimensionality reduction techniques significantly improves model accuracy and makes the random forest model the best model. This study provides an efficient diagnostic tool for CHD, alleviates the challenges posed by limited medical resources, and offers a scientific foundation for precise prevention and intervention strategies.
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