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Updated: Sep 12, 2025

Whole-cell Patch-clamp Recordings for Electrophysiological Determination of Ion Selectivity in Channelrhodopsins
Published on: May 22, 2017
A second photoactivatable state of the anion-conducting channelrhodopsin GtACR1 empowers persistent activity
Kristin Labudda1,2, Mohamad Javad Norahan1,2, Lisa-Marie Hübner1,2
1Center for Protein Diagnostics (PRODI), Biospectroscopy, Ruhr University Bochum, Bochum, Germany.
Abstract:
Optogenetics is a method to regulate cells, tissues and organisms using light. It is applied to study neurons and to develop diagnostic and therapeutic tools for neuron-related diseases. The cation-conducting channelrhodopsin ChR2 triggers photoinduced depolarization of neuronal cells but generates lower ion currents due to the syn-pathway of its branched photocycle. In contrast, the homologous anion-conducting ACR1 from Guillardia theta (GtACR1), exhibits high photocurrents. Here, we investigate the mechanistic cause for the observed high photocurrents in GtACR1 using FTIR spectroscopy. Unexpectedly, we discovered that the O intermediate of GtACR1 is photoactivable, allowing for fast and efficient channel reopening. Our vibrational spectra show a photocyclic reaction sequence after O excitation similar to the ground state photocycle but with slightly altered channel conformation and protonation states. Our results provide deeper insights into the gating mechanism of channelrhodopsins and pave the way to advance the development of optimized optogenetic tools in future.
Insights
Researchers discovered a photoactivable O intermediate in GtACR1, a channelrhodopsin, enabling fast channel reopening. This finding advances optogenetic tools for neuroscience and disease therapy.
Area of Science:
- Optogenetics
- Neuroscience
- Biophysics
Background:
- Optogenetics utilizes light to control cellular functions, with applications in neuroscience and disease therapeutics.
- Channelrhodopsins like ChR2 enable neuronal depolarization but have limited ion currents due to photocycle pathways.
- Anion-conducting channelrhodopsins, such as GtACR1, exhibit significantly higher photocurrents.
Purpose of the Study:
- To elucidate the mechanistic basis for the high photocurrents observed in Guillardia theta anion channelrhodopsin 1 (GtACR1).
- To investigate the photocycle dynamics and gating mechanisms of GtACR1 using advanced spectroscopic techniques.
Main Methods:
- Fourier-transform infrared (FTIR) spectroscopy was employed to analyze GtACR1's photocycle.
- Vibrational spectra were used to study the conformational and protonation state changes during the photoactivation process.
Main Results:
- FTIR spectroscopy revealed that the O intermediate of GtACR1 is photoactivable, facilitating rapid channel reopening.
- Excitation of the O intermediate initiated a photocyclic reaction sequence comparable to the ground state, albeit with subtle alterations in channel conformation and protonation.
- These findings provide mechanistic insights into the efficient gating of GtACR1.
Conclusions:
- The photoactivable O intermediate is a key factor contributing to GtACR1's high photocurrents.
- Understanding this mechanism offers a pathway for developing enhanced optogenetic tools with improved efficiency.
- This research deepens our comprehension of channelrhodopsin gating mechanisms.
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