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Published on: August 25, 2018
Development and selection of stably expressed reference genes for expression normalization in Ribes odoratum under
Jun Xu1, Ting Li1, Xiaowen Liu1,2
1Qinghai Academy of Agriculture and Forestry, Qinghai University, Xining, 810016, China.
Identifying stable internal reference genes is crucial for gene function studies in Ribes odoratum. This research validated reference genes for quantitative PCR (qPCR) under drought stress, finding Cluster-37.22228 and Cluster-37.22646 to be the most reliable.
Area of Science:
- Molecular Biology
- Plant Science
- Genetics
Background:
- Accurate gene expression analysis using quantitative PCR (qPCR) relies on stable internal reference genes for normalization.
- Limited validation studies for reference genes in Ribes odoratum hinder reliable gene function analysis, especially under environmental stresses like drought.
Purpose of the Study:
- To identify and validate stable reference genes for normalizing qPCR data in Ribes odoratum under drought stress conditions.
- To establish a reliable foundation for future molecular biology research in Ribes odoratum.
Main Methods:
- Drought stress treatments were applied to Ribes odoratum.
- Transcriptome analysis was performed to identify candidate reference genes.
- Expression stability of 17 candidate reference genes was evaluated using multiple algorithms (Genorm, NormFinder, BestKeeper, Delta Ct).
Main Results:
- Multiple genes with stable expression under drought stress were identified.
- Cluster-37.22228, Cluster-37.22646, and Cluster-37.22897 demonstrated the highest expression stability.
- Cluster-37.22228 and Cluster-37.22646 were identified as the optimal reference genes for Ribes odoratum under drought stress.
Conclusions:
- This study provides the first comprehensive list of validated reference genes for qPCR in Ribes odoratum under drought stress.
- The identified stable reference genes will enhance the accuracy and reliability of gene expression studies in this species.
- These findings will facilitate future molecular research and genetic studies in Ribes odoratum.
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