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Updated: Sep 12, 2025

Microbiota Analysis Using Two-step PCR and Next-generation 16S rRNA Gene Sequencing
Published on: October 15, 2019
[Progress in studies of seminal microbiome based on next-generation sequencing]
Lin Yang1, Wen-Yan Tian1, Ying-Mei Wang1
1Department of Gynecology and Obstetrics / Tianjin Key Laboratory of Female Reproductive Health and Eugenics, Tianjin Medical University General Hospital, Tianjin 300052, China .
The seminal microbiome, the collection of microbes in semen, significantly impacts male reproductive health and sperm quality. Understanding its composition is crucial for diagnosing infertility and improving assisted reproductive technology outcomes.
Area of Science:
- Reproductive Biology
- Microbiome Research
- Human Physiology
Background:
- The seminal microbiome influences male reproductive health, sperm quality, and assisted reproductive technology outcomes.
- Its transmission can affect female reproduction and offspring health.
- Conventional bacterial culture methods are insufficient for comprehensive analysis.
Purpose of the Study:
- To review the composition of the seminal microbiome.
- To explore its relationship with male infertility and sperm quality impairment.
- To summarize next-generation sequencing (NGS) findings on bacterial colonization in the male reproductive tract.
Main Methods:
- Utilized next-generation sequencing (NGS) to analyze seminal microbiome composition.
- Reviewed existing NGS-based studies on seminal microbiome patterns.
- Examined microbial-host interactions in male reproductive pathophysiology.
Main Results:
- Revealed a unique diversity in seminal microbiome structures.
- Demonstrated a strong correlation between abnormal seminal microbiome and reduced sperm quality/male fertility.
- Identified potential probiotic microbes within semen supporting reproductive function.
Conclusions:
- The seminal microbiome is integral to male fertility and reproductive success.
- Abnormalities in seminal microbiome composition are linked to infertility.
- Further research with larger cohorts is needed to clarify the microbiome's source, precise composition, and mechanisms affecting sperm and pregnancy outcomes.
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